Gene GSU2609 details

Gene Information

• Locus tag: GSU2609
• ID: 2687704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 2877043
• End bp: 2878980
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637127299
• Product: type IV pilus assembly protein, putative
• Protein accession: NP_953654
• Protein GI: 39997703
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCAGA AAAAGGTTGG CGAGATACTT ATCGAGCACC GGCTGATCTC CGAGGATCAG 
CTCCGCGAGG CCCTGGAACT GCAGAAGGTC TTCCCCGACC AACCCGTGGG GCAACTGCTC 
TGCAAGCTCG GGTTCCTGAG CGAGAGTGAG CTGTCCTATA TCCTGGAGCA GACCGGCAAG 
CGCCAGAAGC TGGGCGATAT CCTCATCAGG GAGCGCCTGG TCGACGAGGA GCGCCTGAAC 
CAGGCCCGGG TCGCCGCCAA GCGGGACGGC TCCACGCTGG AGCGTGCCCT CCGCAAGCTG 
CGTCTCGTCG AAGAGGAGCC TCTGGCCAAG ACCATTGCCA CCCAGTACGA CCTCTCCTTT 
GTTCACATCA ACACCCTGGA GATCGAGCCG GACCTCGCCC GCTGCATCAA CCCCAACTAT 
GCCCAGCGCC AGCGGATCGT CCCCATCTCC CGCATCGGCA ACACCATCAC TCTGGCCATG 
GCCTATCCCA TCAAGCTTCA TGAGCTGAAG GAGCTTGAGC AGAGCATCAA GTCGCGGATC 
ATCCCGGTCA TTGCCATGGA GAGCGAGATC ATCCAGGCCC AGCAGCGCCT CTACAAGACC 
GCCGCCAGCG CCGCCCACGC CCTTACCCTC GATGAGGCCG ACCTGGAGAT CGCGCCGGGA 
AGCATCGTCG ACATCCTGAG CTCCGGCGCC GGGGAGGATG AGCCGGACAT CGATGACGAG 
GTGCGCACGA TCACCGAGCG CGACAGTGTC ATCGTCAAGC TCGTCAACAA GATCATCTTC 
GACGCCCACC AGAACCGCGC CTCGGATATC CATATCGAGC CCTATCCCGG CAAGAACGAC 
GTGATCGTCA GGATGCGGGT CGACGGCAGC TGCAAGGTGT ACCAGCGCAT CCCGTTCAAG 
TACAAGTACG CCATCCCCTC GCGCCTCAAG ATCATGGCCG AGCTGGACAT CGCCGAGAAG 
CGCAAGCCCC AGGACGGCAA GATCAATTTC AAGAAATTCG GCCCCCTGGA CCTGGAACTG 
CGGATCGCCA CCATGCCAAC GGCCGGTGGA CTCGAGGACG TGGTCATCCG GCTCCTGAAC 
ACGGGCCAGG CCTATTCATT CGACAGTCTC AGCCTCACCG ACCGCAATAT GCGCATCTTC 
GGGGAATCCA TCACGAAGCC CTACGGCCTT GTCCTGGTGG TGGGCCCCAC CGGAAGCGGC 
AAGACCACCA CCCTCCACGC GGCCATCGCC CGCATCAACC GACCCGAGGT GAAGATCTGG 
ACCGCCGAGG ACCCGGTGGA GATCACCCAG AAGGGGCTCC GGCAGGTTCA GGTCAACCAG 
CGCATCGGCC TCACCTTTGC CGCGGCACTG CGCTCGTTCC TGCGGCTCGA CCCGGACGTG 
ATCATGGTGG GCGAGATGCG GGACGAAGAG ACCGCCTCCA TCGCGGTGGA GGCGTCCCTC 
ACCGGGCACC TGGTCCTGTC GACCCTGCAC ACCAACTCGG CCCCGGAGAC GGTCACCCGC 
CTCCTGGAAA TGGGACTCGA CCCCTTCAGC TTCTCCGATT CGCTTCTCTG CGTCGTGGCC 
CAGCGCCTGG CCCGCCGCCT CTGCGAGGAT TGCCGCGAGC TTTACCGCCC TGACCGCAAG 
GAGCTCTCCG AGATCATCGA GGAGTACGGC GAGGAGCAGT TCGCCGCCAC GGGACTGCTG 
GGCAACGAGG TGGTCCTGGC CCGGCCGGTG GGGTGCACCA CCTGCAACCA GAGCGGCTAC 
CGGGGGCGCC TCGGCATTCA CGAGGTGCTC GAAGGCACCG ACACCATGAA GAGCCTCGTC 
AAGAAGAAGT CCGACACCGA GATCATCCGG CGGCAGGCCA TGGCCGACGG CATGACCACC 
CTGCGGCAGG ACGGCATCCT CAAGGTCTTC CAGGGGCTCA CCGACATCCA CGAAGTACGC 
AAGGTCTGCC TCAAGTAA 

 

Protein sequence

MSQKKVGEIL IEHRLISEDQ LREALELQKV FPDQPVGQLL CKLGFLSESE LSYILEQTGK 
RQKLGDILIR ERLVDEERLN QARVAAKRDG STLERALRKL RLVEEEPLAK TIATQYDLSF 
VHINTLEIEP DLARCINPNY AQRQRIVPIS RIGNTITLAM AYPIKLHELK ELEQSIKSRI 
IPVIAMESEI IQAQQRLYKT AASAAHALTL DEADLEIAPG SIVDILSSGA GEDEPDIDDE 
VRTITERDSV IVKLVNKIIF DAHQNRASDI HIEPYPGKND VIVRMRVDGS CKVYQRIPFK 
YKYAIPSRLK IMAELDIAEK RKPQDGKINF KKFGPLDLEL RIATMPTAGG LEDVVIRLLN 
TGQAYSFDSL SLTDRNMRIF GESITKPYGL VLVVGPTGSG KTTTLHAAIA RINRPEVKIW 
TAEDPVEITQ KGLRQVQVNQ RIGLTFAAAL RSFLRLDPDV IMVGEMRDEE TASIAVEASL 
TGHLVLSTLH TNSAPETVTR LLEMGLDPFS FSDSLLCVVA QRLARRLCED CRELYRPDRK 
ELSEIIEEYG EEQFAATGLL GNEVVLARPV GCTTCNQSGY RGRLGIHEVL EGTDTMKSLV 
KKKSDTEIIR RQAMADGMTT LRQDGILKVF QGLTDIHEVR KVCLK