Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2603 |
Symbol | rpsA |
ID | 2686316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2870277 |
End bp | 2872001 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637127293 |
Product | 30S ribosomal protein S1 |
Protein accession | NP_953648 |
Protein GI | 39997697 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00445858 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATCA AACGATTCGC CGATGCGGAG GACGAGGCGG ATCAGGGGGG CTCCGGCGAG TTCGCCGAGC TTTTCCAGGA GAGTATCAGG CATCACCATG TGGGGGAAGT CGTCAAGGGC AAGGTGGTGC ACATCAGCAA CGATTACGTG CTGGTCGATA TCGGATACAA GTCCGAGGGG AGCATCCCCG TTGAAGAGTT CCTCGACGAG GCAGGCAACC TGACCGTCCA GGTGGGCGAC GAAGTGAAGG CCCTGTTTGA GCGGAAGGAA AACCAGAAGG GGTACGCGGT TCTCTCCAAG CGCAAGGCCG ACCGCCTCTC CGCCTGGGAC TCCATCGACG CCGCCGGCGG CGAAGGCGGC ATCGTCGAAG GCAAGATCAC CGGCAAGGTC AAGGGGGGCC TCACCGTCGA CATCGGCGTC CAGGCGTTCC TGCCTGCCTC CCAGGTTGAT CTCCGCCCCG GCGGCAACCT GGACAAGTAC ATCGGTGTGA CCGACCGCTT CAAGGTGCTC AAGCTCAACA AGAAGCGGGG CAACATCGTT CTCTCCCGTC GCGTCCTGCT GGAAGAGGAA CGGGCCGGCG TCCGCACCGA GACCCTCGCC AACCTGGCCG AGGGCCAGAC TCGCGAAGGC GTGGTCAAGA ACATCACCGA TTACGGCGCA TTCGTCGATA TCGGCGGCGT TGACGGCCTC CTGCACGTGA CCGACATGTC GTGGGGCCGC CTGGGCCACC CCTCCGAGAT GCTCAAGCCG GGCGACAAGC TCAGCGTCAA GATTCTCAAG TACGACCAGG AGAAGGGCAA GATCTCCCTG GGCCTCAAGC AGATCACTCC CGATCCCTGG CTTGCGGTGG AGCAGAAGTT TCAAGTCGGC GACCGGGTCA GCGGCCGCGT GGTCAGCATG ACCGATTACG GCGCATTCGT GGCCCTCGAC GAAGGGGTCG AAGGGCTGGT GCACGTCTCC GAAATGTCGT GGACCAAGCG GCTCCGCCAT CCGTCCGACC TCCTCACCGT GGGCGACGAG GTGGAAACCG TGGTGCTCGG CATCGACACC GGCAACCGCC GCATCTCCCT CGGCCTCAAG CAGGCCCAGG CCAACCCCTG GACCCAGCTG GAGGAGAAAT ACCCCGTCGG CACCAAGCTG GAGGGGCAGA TCAAGAGCAT CACCGACTTC GGCGTCTTCA TCGGCGTTGA CGAGGGAATC GACGGCCTCG TGCACGTTTC CGACATCTCC TGGACCAAGC GGATCAAGCA CCCCGGCGAG GTCTACGCCA AGGGGCAGAC CGTCCAGGCC GTGGTCCTCA ACGTGGACGC CGAGAACGAG CGCCTTTCCC TGGGGATCAA GCAACTCACC CCCGATCCCT GGAGCGTCAT CCCCGCAACC TACCGTCCCG GCACCCGCGT GCGGGGCAAG GTAACCTCCG TGACCGACTT CGGCGTCTTC CTTGAGATCG AAGAGGGGAT CGAAGGGCTG GTGCACGTCT CCGAGCTTTC CCGCGAGAAG GTCGCCTCGC CCAAGGACTT CGCCTCCGTG GGCGACGAGC TGGATGCGGT GGTTCTGAGC GTCGACGACG TGGAGAAGAA GATCGCCCTC TCCGTCAAGG CTCTCCAGGC CGCCGCCGAG AAGGCCGAGC TGGAGTCGTA CATGCAGGAC CGCGGTGAAG CCACCTCCAA CCTGGGTGCC CTGCTCCGGG AGGGGATGCG CAAGAACGGC GACAACAACG ACTAA
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Protein sequence | MTIKRFADAE DEADQGGSGE FAELFQESIR HHHVGEVVKG KVVHISNDYV LVDIGYKSEG SIPVEEFLDE AGNLTVQVGD EVKALFERKE NQKGYAVLSK RKADRLSAWD SIDAAGGEGG IVEGKITGKV KGGLTVDIGV QAFLPASQVD LRPGGNLDKY IGVTDRFKVL KLNKKRGNIV LSRRVLLEEE RAGVRTETLA NLAEGQTREG VVKNITDYGA FVDIGGVDGL LHVTDMSWGR LGHPSEMLKP GDKLSVKILK YDQEKGKISL GLKQITPDPW LAVEQKFQVG DRVSGRVVSM TDYGAFVALD EGVEGLVHVS EMSWTKRLRH PSDLLTVGDE VETVVLGIDT GNRRISLGLK QAQANPWTQL EEKYPVGTKL EGQIKSITDF GVFIGVDEGI DGLVHVSDIS WTKRIKHPGE VYAKGQTVQA VVLNVDAENE RLSLGIKQLT PDPWSVIPAT YRPGTRVRGK VTSVTDFGVF LEIEEGIEGL VHVSELSREK VASPKDFASV GDELDAVVLS VDDVEKKIAL SVKALQAAAE KAELESYMQD RGEATSNLGA LLREGMRKNG DNND
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