| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2539 |
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| Symbol | LYS1 |
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| ID | 2687788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2802886 |
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| End bp | 2804082 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637127229 |
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| Product | saccharopine dehydrogenase |
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| Protein accession | NP_953585 |
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| Protein GI | 39997634 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG TACTGATAAT CGGAGCCGGC GGCGTCGGCC AGGTCGTTGC CCACAAGTGC
GCCCAGCGCA GGGACATCTT CAGCGGGATC ACCCTCGCCT CCCGGACCAA GTCCAAGTGC
GACGCCATCG CCGCCCAGCT GAACAACAGC ATCGCCACTG CCCAGGTGGA CGCGGACAAT
GTTCCCGAGC TGGTGGCGCT CATCAAGAAA GAGCAGCCGA AGCTCGTCAT CAACGTGGCC
CTGCCGTACC AGGACCTGAC CATCATGGAT GCCTGCCTGG AGACCGGCGT GGACTACCTG
GACACCGCCA ACTACGAGCC CCTGGACACC GCCAAGTTCG AGTACTCCTG GCAGTGGGCC
TATCAGGACC GTTTCAAGAG CGCTGGGCTC ATGGCGCTGC TCGGTTCCGG CTTCGACCCC
GGCGTGACCA ACGTCTACAC CGCCCTGGCC GCCAAGAAGT ACCTGGACGA GGTGCAGGAG
ATCGATATCA TCGATGCCAA CGCCGGGAGC CACGGCCAGC CCTTTGCCAC CAACTTCAAC
CCGGAGATCA ACATCCGCGA GGTGACCGCT CCGTGCCGCC ACTGGGAGAA CGGCGAGTTC
GTCGAGACGC CCCCCCTTTC GACCAAGCAG GTCTTCGATT TCCCCGAGGG GATCGGCCCC
ATGAACATCT ATCGTCTCTA TCACGAGGAG ATGGAGTCCA TCGTCAAGCA TATCCCGACC
ATCAGGAAGG CCCAGTTCTG GATGACCTTC TCCGACAACT ACCTGAAGCA CCTGGAGGTG
CTGCAGAACG TGGGCATGAC CCGTATCGAC GAGGTGGAGT TCCAGGGGCA GAAGATCGTG
CCGATCCAGT TCCTGAAGGC GCTCCTCCCC GATCCGGGTT CCCTCGGCCC CCTCACCAAG
GGGAAGACCT GCATCGGCGT CATCGCCCGC GGTCTCAAGG ACGGCAAGCG GAAACAGGTC
TACATCTACA ACATCTGCGA CCACGAGGCC TGCTACAAAG AGGTTGGCTC CCAGGCCATC
AGCTACACCA CCGGCGTACC GGCGGTGGTG GGCGGGATCA TGATGCTGAC CGGCAAATGG
CACGCCCCCG GTGTCTGGAA CATGGAACAG TTCGATCCCG AGCCGTTCCT GGCGGAGCTT
GGGCCCATGG GGCTGCCGAC GGTGGTGGTG GACGGCGGCG AGTGGCCGGA GCTGTAA
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| Protein sequence | MSKVLIIGAG GVGQVVAHKC AQRRDIFSGI TLASRTKSKC DAIAAQLNNS IATAQVDADN
VPELVALIKK EQPKLVINVA LPYQDLTIMD ACLETGVDYL DTANYEPLDT AKFEYSWQWA
YQDRFKSAGL MALLGSGFDP GVTNVYTALA AKKYLDEVQE IDIIDANAGS HGQPFATNFN
PEINIREVTA PCRHWENGEF VETPPLSTKQ VFDFPEGIGP MNIYRLYHEE MESIVKHIPT
IRKAQFWMTF SDNYLKHLEV LQNVGMTRID EVEFQGQKIV PIQFLKALLP DPGSLGPLTK
GKTCIGVIAR GLKDGKRKQV YIYNICDHEA CYKEVGSQAI SYTTGVPAVV GGIMMLTGKW
HAPGVWNMEQ FDPEPFLAEL GPMGLPTVVV DGGEWPEL
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