| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2502 |
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| Symbol | |
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| ID | 2686412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2754063 |
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| End bp | 2757116 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637127192 |
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| Product | spermine/spermidine synthase family protein |
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| Protein accession | NP_953548 |
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| Protein GI | 39997597 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATCC TCATTACCGC TCTCATCTAT CTGATCTTTT TCCTCTCGGG AGCCACCGCC
CTGGTCTATG AGGTCGTCTG GGTCAGAAAG CTCAGCCTCG TGTTCGGCGG CTCGCACCTG
GCGGTGACCA CGGTGCTGGC CGTGGTCATG GGGGGGCTTG CCCTGGGTAG CTGGCTCTTC
GGCCGGCGCG TGCGCACCAC CCGGAACCTG CTGCGCCTCT ACGGTGCCCT TGAGATCGGC
ATCGCCTTTT TCGCCCTGCT CTTCATCGCC CTGCTCAACC TCTATTCCCT GATGCCCGCC
TACTCCTTCG AGTCGCTGAC CGAGCATTCG CACCAGCTGC CCCGCGTGGC CTTGCTCACC
CTGCGGATCG TGCTCGCCGC CATCGCGCTC ATCGTCCCCA CGACCCTGCT GGGGGGGACC
CTGCCGGTGC TGGCCGCGTT CATGGTCCGG GGCCGGCGCG CGGTGGGGCG GGGGGTGGCC
TACCTCTACG CCCTGAACAC CTTCGGCGCG GTGGCCGGCT GTTTTGGGGC CGGATTCTAC
CTGTTGGGGC GGTTCGGGGT ATCGAACACC ATGGCCGGCG CGATCACCGT CAACGTGCTG
CTGGGCATCG CCTGCTTCGC GCTCCAGGGC CCGGCGGCCC GGTACCTGGA GGCCGGCGAG
GATGAGGCCC CGGCGCCCCT GTCCGCTGTT ACGCTGCCCG AGGAGAAGGC CCGCATCGGG
CTCGTGGTCT GGGGGATCGG GGTCAGCGGC TTCTGCGCCC TGGGGTACGA GGTGCTCTGG
ACCCGGGTCC TGGGGATCGT GATCGGCACG AATGTGTACG GCTTCACTTT GATGCTGGCG
GCCTTCCTGA CCGGCATTGC CGCGGGCAGC GGGGCTTATG GCCTGTGGGC CCGCCGCCTC
CGGCCGCCCG AGGAGGGGGG CTGTCCCGTG TCCAAGCTGA TCGGCGGGTT CGGCGTGGTG
CAGATCGTGA TCGGCCTCAG CGCGCTGCTG GTGACCATTC TCATCCGCGA TCTTCCCACC
AGGGTGTTCT TCCTCCAGGA CCTCTTCCTG TCGCAAAGCA CCGACCTGTT CCGCGCGCGT
CAGTTCGCCA ATTTCGCCCT GGTCTTTTCC TACCTGTTCA TCCCGGCCTT TTTCATGGGG
GTGGCCTTTC CCCTGGCCGG CACCCTTGAC GCCTGCCGGC GGCGCAAGGT GGGGCATGCC
GTGGGCGAGG TGCTGACCTG CAACACGATC GGCGCCATTC TCGGCACCGT GGTGAGCGGT
TTCGTGTTGA TCCAGGTCTT CGGCATCGAG CGCTCCCTCT ACCTGCTGGC CACGGTAAAC
GCCGGTTTCG GCCTGTTGAT CCTGGCGCGC CTGCTGCGTG GCACCCCCCG CAGGCTGGCC
ACGGCGGGCA CCGTGCTGGC TGTGGTCGGC GTCATGGCCG TTGCCGGCAC CATGCCCCGG
ATCTGGGACG CCAAGTACTT TGCCATCTAC CGCACCAACC AGCCGGAGGT GTTCAGGACC
CCGGACCTGA TTGCCGAGGC CAAGCGGCAC ACCGATGTCC TCTATTACGC CGAGGGAATC
CAGTCCATCG TCAGCTCCAT CAGGATCAGG GGGGGCTACC AGGCGTTCCT GCGCAACGGC
CGGATCGAGG CGTCCGACCA CAATGAGAGC CTTCAGAACC AGTACGCCCT GGGTCACCTG
CCCATGCTTC TGCACCGCAA CCCGCGCAAG GTGCTGGTGA TCGGCGCGGG CAGCGGGATT
ACCCTTGGCG CTGTTTCGCT CCACCCGAGC GTGTCCGAGA TGACGCTGGC CGAGGTGGAG
CCGAAGGTGC TGGGGGTGAC GCGCTCCTTT GCCGCCTACA ACCACGGCGT GCTCGGAGAC
CGCCGGCTGC GGGTGGCGTT CAGCGACGGC CGCAACTACC TGGCGACCAC GGGCGAGCGC
TACGACGTGA TCACCGCCGA TCCGATCCAC CCGTGGCTGA GCGGCGCCGG CTACAACTAC
ACCCGCGAGT ATTTCGAGCT GGCCGCAGAG CACCTGCGGG CCGGCGGCAT CATGTGCCAG
TGGCTCCCCC TCTACGATCT TTCCGCCGAC GATCTCAGGT CGGTGGTCCG GACCTTCCGG
CAGGCTTACC GCCACGTCCT GGTCTGGATG ACCCAGGGGG ATGCCATGCT CATCGGCAGC
AACGCCCCCA TCCTCCTGAG CGAGGACGAG CTGGCCGCCC GGATCGCCGT GCCGGCCGTG
GCCGCCGATC TGGCACGGGT GCAGATGGGG AGCGCCACCG ACCTGCTGAG TTATTTCGTC
ATGGGCACGG CGGGTGCTGA CAGGTTCAGC CGTACTGGTA GAATTAACAC TGACGACAAC
CTCTATCTCG AATTCTCGGT TCCCCGTTCC ACCGGCAAGT CAGCGCTGCC GGAGGTCAAC
GTGAACGCCC TTGCCCGGCA CCGGGAGAGC GTCCTGGCCT ACCTGGACGA CAGCGTGCCG
CCGGCGGACC GGCTCGCCCG GGAGAACCGC TGGATGAGGC TCGACCGCGC CGCGGCCCTG
GCCCTGGAGG CCCGGGCCAT CTTCCTGGGC GGGCGCTACG ATTCGCCCCG GTTCGGCCTC
CTGGTCTCCG AGCTGGAAGG GAACTATGCC GCGTTCGCTC CGTGGCGGTT CCTGCGCAGC
GAATACCTGG AGGAAATGGC GAGCAGTCCG CTGCCGCTCG ATCAACTGGC ATTGGCCTTG
CTAGATGAAT CTGGTCGCCG GGTCGTCGTG AACGTTGCCG CGGTCATGAG CCGCGTCAGC
CGTGAGCTGA CGGTGGTTGA TTTCGTGGAC AGCGACGAGC GGGTGATCAT CGGCCAGGCG
GACATTAACG GCAGGGGGCG GGATGGCTCG GCCAAAAGGC TGGCCGCCGA GGTGATGGAG
GCCGTCCGGC TTGCCTACAA CGAGGAGTTG AGCGGGGCGG AGGCGCGCGG CAAGCCGCTT
CCGGACCAGG CGGAATTTGT CCGCAGGATG CGGGAAATCA TCGCGACCAT GACGGGCCGG
CAGCACGGCA ACCCGTACCC GGCCCAGGGT CGACCCATTA AGGAATCGGC GTGA
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| Protein sequence | MPILITALIY LIFFLSGATA LVYEVVWVRK LSLVFGGSHL AVTTVLAVVM GGLALGSWLF
GRRVRTTRNL LRLYGALEIG IAFFALLFIA LLNLYSLMPA YSFESLTEHS HQLPRVALLT
LRIVLAAIAL IVPTTLLGGT LPVLAAFMVR GRRAVGRGVA YLYALNTFGA VAGCFGAGFY
LLGRFGVSNT MAGAITVNVL LGIACFALQG PAARYLEAGE DEAPAPLSAV TLPEEKARIG
LVVWGIGVSG FCALGYEVLW TRVLGIVIGT NVYGFTLMLA AFLTGIAAGS GAYGLWARRL
RPPEEGGCPV SKLIGGFGVV QIVIGLSALL VTILIRDLPT RVFFLQDLFL SQSTDLFRAR
QFANFALVFS YLFIPAFFMG VAFPLAGTLD ACRRRKVGHA VGEVLTCNTI GAILGTVVSG
FVLIQVFGIE RSLYLLATVN AGFGLLILAR LLRGTPRRLA TAGTVLAVVG VMAVAGTMPR
IWDAKYFAIY RTNQPEVFRT PDLIAEAKRH TDVLYYAEGI QSIVSSIRIR GGYQAFLRNG
RIEASDHNES LQNQYALGHL PMLLHRNPRK VLVIGAGSGI TLGAVSLHPS VSEMTLAEVE
PKVLGVTRSF AAYNHGVLGD RRLRVAFSDG RNYLATTGER YDVITADPIH PWLSGAGYNY
TREYFELAAE HLRAGGIMCQ WLPLYDLSAD DLRSVVRTFR QAYRHVLVWM TQGDAMLIGS
NAPILLSEDE LAARIAVPAV AADLARVQMG SATDLLSYFV MGTAGADRFS RTGRINTDDN
LYLEFSVPRS TGKSALPEVN VNALARHRES VLAYLDDSVP PADRLARENR WMRLDRAAAL
ALEARAIFLG GRYDSPRFGL LVSELEGNYA AFAPWRFLRS EYLEEMASSP LPLDQLALAL
LDESGRRVVV NVAAVMSRVS RELTVVDFVD SDERVIIGQA DINGRGRDGS AKRLAAEVME
AVRLAYNEEL SGAEARGKPL PDQAEFVRRM REIIATMTGR QHGNPYPAQG RPIKESA
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