| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2448 |
|---|
| Symbol | sucB |
|---|
| ID | 2687927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2684931 |
|---|
| End bp | 2686160 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637127138 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | NP_953494 |
|---|
| Protein GI | 39997543 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA AAATACCATC GGTGGGTGAA TCGGTATTCG AGGCCCTGGT GGCCACGTGG
CTCCGCCAGG ACGGCGATGC GGTCCGCAAG GACGAGCCGG TCTGCGAGAT CGAGACCGAC
AAGATCACCA TGGAGCTTAA CGCTGAGGCC GACGGGGTTC TCTCCATCGC GGTGCCGGCC
GGGACCACGG TGAAGATCGG CACGGTCATC GGTACCATTC GCGAAGGCGC TGCCGCCCCC
GTTGCCGAGT CGCCGGCTCC GGCACAGGCC GCTGCCGCCG CGCCCGCCGC AGAGCCCCCT
CTTTCCCCGT CGGTGCGTAA AATGGCGCGG GAGCGGGGGA TCAGCCCCGA GGCGGTGCCC
GGTACCGGCC GGGGAGGGCG GGTGACGGTG GATGATCTCT TCTCCTTTGC CGAAAAGCGG
GAGCAGGGGG CGTCTCCGGC CGGGGCTCCT CCGCCGGCCG CTCCCCAGCC TCCCGCGCAG
CAGCCCCGGC CGGCGGCAGA GCAGCCCCGC CAGGCCGAGC CGCCGGAGGC CGATCGCACC
ACCCGCACCC CCATGACCCC CATCCGCAAG CGGATCGCGG AACGTCTCAT GGCGGCGCGT
CAGCAGACCG CCATGCTCAC CACCTTCAAC GAGGCCGATC TGGGGCGCAT TGTGGAACTG
CGTGCCCGCC ACAAGGAGCA GTTCGCCAAG CGGCACGGGG TATCCTTGGG GTTCATGTCG
TTCTTCGTCA AGGCCTGCGT AGAGGCCCTG AAAGCCTTTC CCCTGGTGAA CGCCCGCATC
GACGGCAACG ACATCGTCCG GCACCACTAC TACAACATCG GCATCGCCAT CGGCGCGGAC
AAGGGGCTGG TGGTGCCGGT GCTCCGGGAT GCGGACCGCC TCCATTTCTG GGAGATCGAA
CAGGCCATCG CCGCCTTTGT CGAAAAGATC AAAACCAACC GGCTCGAACT CTCGGACCTG
GAGGGGGGCA CCTTCTCCAT AACCAACGGC GGGGTGTACG GCTCGCTCCT TTCCACCCCC
ATCCTCAATC CGCCCCAGAG CGGGGTGCTC GGCATGCACG CCATTCAGGA CCGTCCCGTG
GCCCGGGACG GGCAGGTGGT CATCCGGCCC ATGATGTACC TGGCCCTGTC CTACGACCAC
CGGATCATCG ACGGCCGCGA AGCGGTGGGA TTCCTGCGCA CGGTGAAAGA GTATGTGGAA
GATCCGGAGG AGCTGTTCCT TGAGGGGTAG
|
|---|
| Protein sequence | MEIKIPSVGE SVFEALVATW LRQDGDAVRK DEPVCEIETD KITMELNAEA DGVLSIAVPA
GTTVKIGTVI GTIREGAAAP VAESPAPAQA AAAAPAAEPP LSPSVRKMAR ERGISPEAVP
GTGRGGRVTV DDLFSFAEKR EQGASPAGAP PPAAPQPPAQ QPRPAAEQPR QAEPPEADRT
TRTPMTPIRK RIAERLMAAR QQTAMLTTFN EADLGRIVEL RARHKEQFAK RHGVSLGFMS
FFVKACVEAL KAFPLVNARI DGNDIVRHHY YNIGIAIGAD KGLVVPVLRD ADRLHFWEIE
QAIAAFVEKI KTNRLELSDL EGGTFSITNG GVYGSLLSTP ILNPPQSGVL GMHAIQDRPV
ARDGQVVIRP MMYLALSYDH RIIDGREAVG FLRTVKEYVE DPEELFLEG
|
|---|
| |