| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2446 |
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| Symbol | lpdA-1 |
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| ID | 2687934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2682484 |
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| End bp | 2683902 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637127136 |
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| Product | 2-oxoglutarate dehydrogenase complex, E3 component, lipoamide dehydrogenase |
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| Protein accession | NP_953492 |
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| Protein GI | 39997541 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGC AAACCTTCGA CCTTATCGTC ATCGGCGCCG GACCCGGCGG CTACGTGGCC
GCCATCAGGG CTGCCCAGCT TGGCATGACC GTGGCGGTGG CGGAACAGCG CGAAACCCTC
GGCGGGGTCT GCCTCAACGA GGGGTGCATC CCCAGCAAGG CGCTCCTGGA CTCATCGGAG
TTCTTTGCCC AGGCCCGGGA CGGCTTTGCC GGCCACGGCA TCCTGATTGA CCCTCCGCGG
CTCGACCTGG CGCGGATGAT GGCCCGCAAG GACGATGTGG TGAAAAAGCT CACCGACGGC
ATCGCCTACC TCTTCAAGAA GAACCGGATA ACCTGGCTGA AGGGGACGGC TCGCCTGGCG
GGCAGAAACG GCGATCTCCT GCGGGTGGAG GTGGGCGGCA ACGGGACGGC GCCCGCGCAC
CTGCTGGAGG CCGGCAAGGT GCTCCTTGCC ACCGGCAGCG AGGCGGTGCC GGTACCGGGC
CTCGCCTTTG ACGGGGAGAC CGTGGTCTCC GCCCGGGAAG CCCTGGCCTT CGACCGGGTG
CCGGAGCATC TGCTGGTGGT GGGGGCCGGC TACATCGGGC TGGAGCTGGG GTCGGTCTGG
CGCCGGCTCG GCAGCCAGGT GACCGTGGTG GAGGTGCTGG CCAAGCCGCT CCCCGCCACC
GACGGCCAGG TGGCCGACGC TCTGGTGCGC TCCCTGAAGA AGCAGGGGAT CTCCTTCCGC
ATGGAGACAC GGGTGACCGG CATCGAGAAG CGGGAGGGCA CGGCCGTGGT CACGGTGGAA
TCGTCCGCCG GCGGGCGCGA CGCCATCGCC TGCGACCGGG TCCTGGTGGC CGCCGGCCGC
CGCCCCGTCA TGGCCGGGCT CGGCCTCGAA CCCTTCAATC TCGCCATGGA GGGGGGGCGC
ATCCGGGTGG ACGACAACTA CCTGACCTCG GCCCCGGGGA TCTACGCCAT CGGCGACCTG
ATCCACGGAC CCATGCTCGC CCACAAGGCC ATGGCCGAGG GGGAAGTCTT CGCCGAGCGC
CTGACCGGCG AGGCGTCGGT CGTGGACTAC GAATACATCC CTGGTATCGT GTATACGTGG
CCCGAGGCGG CCGGCGTCGG CCTGACCGAA GAGCAGCTCA AGGAACAGGG GATTCCCTAT
GCCGCGGGCC GGTTCAATTT CATGGCCAAC GGTCGGGCAC GCTGCATGGG GGAAACCGAA
GGATTCGTGA AGATCCTGGC CAAGCCCGAC ACGGGCCGGG TCCTGGGCAT CCATGTGGTC
GGCCCCCGCG CCTCGGACCT CATTGCCGAG GCGGTCACCG TCATGACCTA CGGTGGCAGC
GCCGCCGACA TCGCCATGAC CTTCCACGCC CACCCGACCC TCGCCGAGGC CATGAAGGAA
GCGGCCCTGG ACGTGGAGAA ACGGGCGATA CATGCGTAA
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| Protein sequence | MAEQTFDLIV IGAGPGGYVA AIRAAQLGMT VAVAEQRETL GGVCLNEGCI PSKALLDSSE
FFAQARDGFA GHGILIDPPR LDLARMMARK DDVVKKLTDG IAYLFKKNRI TWLKGTARLA
GRNGDLLRVE VGGNGTAPAH LLEAGKVLLA TGSEAVPVPG LAFDGETVVS AREALAFDRV
PEHLLVVGAG YIGLELGSVW RRLGSQVTVV EVLAKPLPAT DGQVADALVR SLKKQGISFR
METRVTGIEK REGTAVVTVE SSAGGRDAIA CDRVLVAAGR RPVMAGLGLE PFNLAMEGGR
IRVDDNYLTS APGIYAIGDL IHGPMLAHKA MAEGEVFAER LTGEASVVDY EYIPGIVYTW
PEAAGVGLTE EQLKEQGIPY AAGRFNFMAN GRARCMGETE GFVKILAKPD TGRVLGIHVV
GPRASDLIAE AVTVMTYGGS AADIAMTFHA HPTLAEAMKE AALDVEKRAI HA
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