Gene GSU2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2428 
Symbolpyc 
ID2686508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2660074 
End bp2663520 
Gene Length3447 bp 
Protein Length1148 aa 
Translation table11 
GC content64% 
IMG OID637127118 
Productpyruvate carboxylase 
Protein accessionNP_953474 
Protein GI39997523 
COG category[C] Energy production and conversion 
COG ID[COG1038] Pyruvate carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit
[TIGR01235] pyruvate carboxylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0297637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA GAAAGTTCAG AAAAGTAATG GCCGCCAACC GCGGAGAGAT CGCGATCCGC 
ATCTTCCGGG CCTGCACTGA GCTGGGGATC AGCACGGTGG CCATCTACTC GGAGGAGGAC
AAGCTGTCCC TCCACCGCTA CAAGGCGGAC GAGGCCTACC TGGTGGGCAA GGGGAAAGCC
CCCATCGATG CCTACCTGGG GATCGACGAA ATCATCTCCA TTGCCAAGCG GGCGGACGTG
GACGCCATTC ACCCGGGCTA CGGCTTCCTT TCGGAGAATG CCGAGTTCGC CGAGGCGTGC
GAGCGGGCCG GCATCGCCTT CATCGGTCCC CGGGCCGAGA TGCAGCGGGC CCTGGGCGAC
AAGGTCTCGG CCCGCAAGGT GGCCATTGCC GCCGAGGTGC CCGTGGTTCC CGGAACCGAG
GAGCCCATCG AGCACGAGGA AGAAGCGCTC ATCTTCGCCA AGCAGCACGG CTATCCCATC
ATCATCAAGG CGGCTGCCGG CGGCGGCGGG CGGGGCATGC GGGTTGCCCG CAACAAGAAA
GAGCTGCTGG AGGGGCTGGT GGCGGCCCGC AGCGAGGCCA AGGCCGCCTT CGGCAACCCG
GCGGTCTTCC TGGAGCGCTA CCTGGAGAAT CCCAAGCACA TCGAGGTGCA GGTGCTGGGG
GACCACCACG GCAACCTGGT CCACTTCTAC GAGCGCGACT GCTCCATCCA GCGCCGTCAC
CAGAAGGTGG TTGAGTTCGC GCCGTCGCTC TCCCTGACCC AGAAGCTGCG GGACGAGATC
TGCAACGCGG CCCTCAAGAT CGCGGGTCAG GTGGGCTACG TGAACGCCGG CACCGTGGAA
TTCCTGCTGG ACCAGGAGGG GAGCTGGTAC TTCATCGAGA TGAACCCCCG AATCCAGGTG
GAGCACACGG TCACCGAGAT GATCACCGGC AGGAACCTGG TGCAGGCCCA GATCCTCATC
GCCGAGGGGA AGAAGCTCTC GGACCCCCCC ATCAACGTCC CGAACCAGTC GGCCATCGCC
ATGCGGGGCT ACGCCATCCA GTGCCGGATC ACCACCGAGG ACCCGGCCAA CAACTTTGCC
CCGGATTTCG GCACCATCAC CACCTACCGC TCCTCGGCCG GCTTCGGGGT GCGGCTCGAC
GCGGGCAACG CCTTCACCGG TTCGGTCATC ACCCCCCATT ACGACTCGCT TCTGGTGAAG
GTCACCTCGT GGGGGCTCAC CTTCGACGAG GCGGCCCACA TCATGAACCG CTCCCTCCAG
GAGTTCCGGG TCCGGGGCGT GAAGACCAAT ATCCCGTTCC TGGAGAACGT GGTCACCCAC
CCGGTCTTCC TGGCCGGTAC CTGCGATACG TCATTCATCG AGAAGCACCC CGAGCTTCTG
GCCATTAGCG AGAAGAAAGA CCGGGCCACC AAGGTGCTCA ATTTCCTGGG CGACGTCATC
GTGAACGGCT CCCCCGGCGT TGCCAAGCCC CTCAAGTCGG CGGAGATGAT CGAGGCCCGG
GTGCCCGAGG TTGACTATAC GGTTCCCCGG CCCGCCGGCT CCCGCGACCT GTTCATGAAG
CTCGGCGCCG AGGGGCTCTC CAAGTGGATC CTGGAGCAGA AAAAGCTCCT GATCACCGAC
ACCACCATGC GGGATGCCCA CCAGTCGCTC CTGGCGACCC GGGTCCGCAC CTATGACCTG
CTAAAGATCG CCGAGCCCAC CTCGTACCTG GGTGCCGGGC TCTTCTCGCT GGAGTGCTGG
GGCGGCGCCA CCTTCGACGT CTCCATGCGC TTCCTGAAGG AGGATCCCTG GCAGCGGCTC
CACAAGCTCT CGGAGGCGAT CCCCAACATC CTCTTCCAGA TGCTCCTGCG GGGCTCCAAC
GCCGTGGGCT ACACCAACTA TCCCGACAAC GTGGTGCAGC GCTTCGTGGA GGAGGCCGCC
GCCAGCGGCG TCGACATCTT CCGGGTCTTC GATTCCCTCA ACTGGACCCG GGGGATGACC
GTGGCCATGG AGGCGGTGCG CAAGACCGGC AAGATCTGCG AGGCGGCCAT CTGCTACACC
GGCGACATCA CCGATCCCAA GCGGGACAAG TATCCGCTGG AATACTACGT GGCCATGGCC
AAGGAACTGG AGCAGATGGG CGCCCACATC CTGGCCATCA AGGACATGGC GGGGCTGCTC
AAGCCCATGG CCGCCCACAA GCTGGTGAAG GCCCTCAAGG AGAACATCGG CATCCCGGTC
CACCTCCATA CCCACGATAC CTCCTCCAAC GGCAACGCCA CGCTGCTCAT GGCCTGCCAG
GCCGGGGTCG ACATCGTGGA CGCGGCCCTC TCCTCCATCT CCGGCCTCAC GGCCCAGCCG
AACCTGAACG CGCTCCTGGC CGCCCTCAAG GGGACCGAGT GGGACCCGGC CCTGGACGAC
GAGGGGCTCC AGCACCTGGC CAACTACTGG GAGACGGTGC GGGACTACTA CACCCCCTTC
GAATCGGGGC TCAAGAGCGG CACTGCCGAG GTCTACCACC ACGAGATCCC CGGCGGCCAG
TACTCCAACT ACAAGCCCCA GGTGGCCGGT CTCGGCCTGC TGGACCGGTG GGAGGAGTGC
AAGGAGATGT ACTTCAAGGT CAACAGGCTC TTTGGCGACA TCGTCAAGGT GACCCCCTCC
TCCAAGGTGG TGGGCGACAT GGCCATGTTC CTGGTGAAAA ACAACCTGGA CGTGGACGAC
GTCTTCACCA AGGGGGACGA GCTCAGCTTC CCCGAGTCGG TAGTGGGGAT GTTCAAGGGG
ATGCTGGGCC AGCCCTACCA GGGGTGGCCC GCTGAGCTGC AGAAGATCAT CCTCAAGGGA
GAAGAGCCGA TCACCTGCCG CCCCGGCGAG CTCCTGGAGC CGGCCGACTT CGAAGAGAAG
CGCCTGGAGG CCGAGACCAA GGTGGGGCAC GCGGTGAACG ACAAGGATCT CATGTCGTAC
CTGCTCTACC CTCATGTCTA CCCCGAGTTC GACAAGCACC GTCAGGAGTA TTCGGACACC
TCGGTCATCC CGACCCCCAT CTTCTTCTAC GGCCTGGAGC CGGGGCAGGA GACCTCCATC
GACATCGAGC CGGGCAAGAC CCTCATCATC AAGCTCAACG CCGTCGGCAA GGTGCATCCG
GACGGTACCC GCCACATCTT CTTCGAGCTT AACGGCCAAC AGCGGCAGGT GGTGGTGCGC
GACCAATCGG TGCAGACCGA CGAGGCCGAG CGGGAAAAGG CCGACAAGGG GAACGCCAAG
CATATCGGCG CGCCCATGCC CGGCAAGGTC CTGAAGCTCA ATGTGAAGGC GGGCGACGTC
GTGAAGGCGG GAGACGTCCT CATGGTTACC GAGGCCATGA AGATGGAGAC CAACATCAAG
GCGAAAGAAG ACGGCGCCGT TGCCGAGGTG AAGTTCAAGG AAGGCGACAA GGTGGAAAAA
GAAGATCTGG TGATCGTGAT GGCATAG
 
Protein sequence
MEKRKFRKVM AANRGEIAIR IFRACTELGI STVAIYSEED KLSLHRYKAD EAYLVGKGKA 
PIDAYLGIDE IISIAKRADV DAIHPGYGFL SENAEFAEAC ERAGIAFIGP RAEMQRALGD
KVSARKVAIA AEVPVVPGTE EPIEHEEEAL IFAKQHGYPI IIKAAAGGGG RGMRVARNKK
ELLEGLVAAR SEAKAAFGNP AVFLERYLEN PKHIEVQVLG DHHGNLVHFY ERDCSIQRRH
QKVVEFAPSL SLTQKLRDEI CNAALKIAGQ VGYVNAGTVE FLLDQEGSWY FIEMNPRIQV
EHTVTEMITG RNLVQAQILI AEGKKLSDPP INVPNQSAIA MRGYAIQCRI TTEDPANNFA
PDFGTITTYR SSAGFGVRLD AGNAFTGSVI TPHYDSLLVK VTSWGLTFDE AAHIMNRSLQ
EFRVRGVKTN IPFLENVVTH PVFLAGTCDT SFIEKHPELL AISEKKDRAT KVLNFLGDVI
VNGSPGVAKP LKSAEMIEAR VPEVDYTVPR PAGSRDLFMK LGAEGLSKWI LEQKKLLITD
TTMRDAHQSL LATRVRTYDL LKIAEPTSYL GAGLFSLECW GGATFDVSMR FLKEDPWQRL
HKLSEAIPNI LFQMLLRGSN AVGYTNYPDN VVQRFVEEAA ASGVDIFRVF DSLNWTRGMT
VAMEAVRKTG KICEAAICYT GDITDPKRDK YPLEYYVAMA KELEQMGAHI LAIKDMAGLL
KPMAAHKLVK ALKENIGIPV HLHTHDTSSN GNATLLMACQ AGVDIVDAAL SSISGLTAQP
NLNALLAALK GTEWDPALDD EGLQHLANYW ETVRDYYTPF ESGLKSGTAE VYHHEIPGGQ
YSNYKPQVAG LGLLDRWEEC KEMYFKVNRL FGDIVKVTPS SKVVGDMAMF LVKNNLDVDD
VFTKGDELSF PESVVGMFKG MLGQPYQGWP AELQKIILKG EEPITCRPGE LLEPADFEEK
RLEAETKVGH AVNDKDLMSY LLYPHVYPEF DKHRQEYSDT SVIPTPIFFY GLEPGQETSI
DIEPGKTLII KLNAVGKVHP DGTRHIFFEL NGQQRQVVVR DQSVQTDEAE REKADKGNAK
HIGAPMPGKV LKLNVKAGDV VKAGDVLMVT EAMKMETNIK AKEDGAVAEV KFKEGDKVEK
EDLVIVMA