Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2428 |
Symbol | pyc |
ID | 2686508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2660074 |
End bp | 2663520 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637127118 |
Product | pyruvate carboxylase |
Protein accession | NP_953474 |
Protein GI | 39997523 |
COG category | [C] Energy production and conversion |
COG ID | [COG1038] Pyruvate carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit [TIGR01235] pyruvate carboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0297637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAGA GAAAGTTCAG AAAAGTAATG GCCGCCAACC GCGGAGAGAT CGCGATCCGC ATCTTCCGGG CCTGCACTGA GCTGGGGATC AGCACGGTGG CCATCTACTC GGAGGAGGAC AAGCTGTCCC TCCACCGCTA CAAGGCGGAC GAGGCCTACC TGGTGGGCAA GGGGAAAGCC CCCATCGATG CCTACCTGGG GATCGACGAA ATCATCTCCA TTGCCAAGCG GGCGGACGTG GACGCCATTC ACCCGGGCTA CGGCTTCCTT TCGGAGAATG CCGAGTTCGC CGAGGCGTGC GAGCGGGCCG GCATCGCCTT CATCGGTCCC CGGGCCGAGA TGCAGCGGGC CCTGGGCGAC AAGGTCTCGG CCCGCAAGGT GGCCATTGCC GCCGAGGTGC CCGTGGTTCC CGGAACCGAG GAGCCCATCG AGCACGAGGA AGAAGCGCTC ATCTTCGCCA AGCAGCACGG CTATCCCATC ATCATCAAGG CGGCTGCCGG CGGCGGCGGG CGGGGCATGC GGGTTGCCCG CAACAAGAAA GAGCTGCTGG AGGGGCTGGT GGCGGCCCGC AGCGAGGCCA AGGCCGCCTT CGGCAACCCG GCGGTCTTCC TGGAGCGCTA CCTGGAGAAT CCCAAGCACA TCGAGGTGCA GGTGCTGGGG GACCACCACG GCAACCTGGT CCACTTCTAC GAGCGCGACT GCTCCATCCA GCGCCGTCAC CAGAAGGTGG TTGAGTTCGC GCCGTCGCTC TCCCTGACCC AGAAGCTGCG GGACGAGATC TGCAACGCGG CCCTCAAGAT CGCGGGTCAG GTGGGCTACG TGAACGCCGG CACCGTGGAA TTCCTGCTGG ACCAGGAGGG GAGCTGGTAC TTCATCGAGA TGAACCCCCG AATCCAGGTG GAGCACACGG TCACCGAGAT GATCACCGGC AGGAACCTGG TGCAGGCCCA GATCCTCATC GCCGAGGGGA AGAAGCTCTC GGACCCCCCC ATCAACGTCC CGAACCAGTC GGCCATCGCC ATGCGGGGCT ACGCCATCCA GTGCCGGATC ACCACCGAGG ACCCGGCCAA CAACTTTGCC CCGGATTTCG GCACCATCAC CACCTACCGC TCCTCGGCCG GCTTCGGGGT GCGGCTCGAC GCGGGCAACG CCTTCACCGG TTCGGTCATC ACCCCCCATT ACGACTCGCT TCTGGTGAAG GTCACCTCGT GGGGGCTCAC CTTCGACGAG GCGGCCCACA TCATGAACCG CTCCCTCCAG GAGTTCCGGG TCCGGGGCGT GAAGACCAAT ATCCCGTTCC TGGAGAACGT GGTCACCCAC CCGGTCTTCC TGGCCGGTAC CTGCGATACG TCATTCATCG AGAAGCACCC CGAGCTTCTG GCCATTAGCG AGAAGAAAGA CCGGGCCACC AAGGTGCTCA ATTTCCTGGG CGACGTCATC GTGAACGGCT CCCCCGGCGT TGCCAAGCCC CTCAAGTCGG CGGAGATGAT CGAGGCCCGG GTGCCCGAGG TTGACTATAC GGTTCCCCGG CCCGCCGGCT CCCGCGACCT GTTCATGAAG CTCGGCGCCG AGGGGCTCTC CAAGTGGATC CTGGAGCAGA AAAAGCTCCT GATCACCGAC ACCACCATGC GGGATGCCCA CCAGTCGCTC CTGGCGACCC GGGTCCGCAC CTATGACCTG CTAAAGATCG CCGAGCCCAC CTCGTACCTG GGTGCCGGGC TCTTCTCGCT GGAGTGCTGG GGCGGCGCCA CCTTCGACGT CTCCATGCGC TTCCTGAAGG AGGATCCCTG GCAGCGGCTC CACAAGCTCT CGGAGGCGAT CCCCAACATC CTCTTCCAGA TGCTCCTGCG GGGCTCCAAC GCCGTGGGCT ACACCAACTA TCCCGACAAC GTGGTGCAGC GCTTCGTGGA GGAGGCCGCC GCCAGCGGCG TCGACATCTT CCGGGTCTTC GATTCCCTCA ACTGGACCCG GGGGATGACC GTGGCCATGG AGGCGGTGCG CAAGACCGGC AAGATCTGCG AGGCGGCCAT CTGCTACACC GGCGACATCA CCGATCCCAA GCGGGACAAG TATCCGCTGG AATACTACGT GGCCATGGCC AAGGAACTGG AGCAGATGGG CGCCCACATC CTGGCCATCA AGGACATGGC GGGGCTGCTC AAGCCCATGG CCGCCCACAA GCTGGTGAAG GCCCTCAAGG AGAACATCGG CATCCCGGTC CACCTCCATA CCCACGATAC CTCCTCCAAC GGCAACGCCA CGCTGCTCAT GGCCTGCCAG GCCGGGGTCG ACATCGTGGA CGCGGCCCTC TCCTCCATCT CCGGCCTCAC GGCCCAGCCG AACCTGAACG CGCTCCTGGC CGCCCTCAAG GGGACCGAGT GGGACCCGGC CCTGGACGAC GAGGGGCTCC AGCACCTGGC CAACTACTGG GAGACGGTGC GGGACTACTA CACCCCCTTC GAATCGGGGC TCAAGAGCGG CACTGCCGAG GTCTACCACC ACGAGATCCC CGGCGGCCAG TACTCCAACT ACAAGCCCCA GGTGGCCGGT CTCGGCCTGC TGGACCGGTG GGAGGAGTGC AAGGAGATGT ACTTCAAGGT CAACAGGCTC TTTGGCGACA TCGTCAAGGT GACCCCCTCC TCCAAGGTGG TGGGCGACAT GGCCATGTTC CTGGTGAAAA ACAACCTGGA CGTGGACGAC GTCTTCACCA AGGGGGACGA GCTCAGCTTC CCCGAGTCGG TAGTGGGGAT GTTCAAGGGG ATGCTGGGCC AGCCCTACCA GGGGTGGCCC GCTGAGCTGC AGAAGATCAT CCTCAAGGGA GAAGAGCCGA TCACCTGCCG CCCCGGCGAG CTCCTGGAGC CGGCCGACTT CGAAGAGAAG CGCCTGGAGG CCGAGACCAA GGTGGGGCAC GCGGTGAACG ACAAGGATCT CATGTCGTAC CTGCTCTACC CTCATGTCTA CCCCGAGTTC GACAAGCACC GTCAGGAGTA TTCGGACACC TCGGTCATCC CGACCCCCAT CTTCTTCTAC GGCCTGGAGC CGGGGCAGGA GACCTCCATC GACATCGAGC CGGGCAAGAC CCTCATCATC AAGCTCAACG CCGTCGGCAA GGTGCATCCG GACGGTACCC GCCACATCTT CTTCGAGCTT AACGGCCAAC AGCGGCAGGT GGTGGTGCGC GACCAATCGG TGCAGACCGA CGAGGCCGAG CGGGAAAAGG CCGACAAGGG GAACGCCAAG CATATCGGCG CGCCCATGCC CGGCAAGGTC CTGAAGCTCA ATGTGAAGGC GGGCGACGTC GTGAAGGCGG GAGACGTCCT CATGGTTACC GAGGCCATGA AGATGGAGAC CAACATCAAG GCGAAAGAAG ACGGCGCCGT TGCCGAGGTG AAGTTCAAGG AAGGCGACAA GGTGGAAAAA GAAGATCTGG TGATCGTGAT GGCATAG
|
Protein sequence | MEKRKFRKVM AANRGEIAIR IFRACTELGI STVAIYSEED KLSLHRYKAD EAYLVGKGKA PIDAYLGIDE IISIAKRADV DAIHPGYGFL SENAEFAEAC ERAGIAFIGP RAEMQRALGD KVSARKVAIA AEVPVVPGTE EPIEHEEEAL IFAKQHGYPI IIKAAAGGGG RGMRVARNKK ELLEGLVAAR SEAKAAFGNP AVFLERYLEN PKHIEVQVLG DHHGNLVHFY ERDCSIQRRH QKVVEFAPSL SLTQKLRDEI CNAALKIAGQ VGYVNAGTVE FLLDQEGSWY FIEMNPRIQV EHTVTEMITG RNLVQAQILI AEGKKLSDPP INVPNQSAIA MRGYAIQCRI TTEDPANNFA PDFGTITTYR SSAGFGVRLD AGNAFTGSVI TPHYDSLLVK VTSWGLTFDE AAHIMNRSLQ EFRVRGVKTN IPFLENVVTH PVFLAGTCDT SFIEKHPELL AISEKKDRAT KVLNFLGDVI VNGSPGVAKP LKSAEMIEAR VPEVDYTVPR PAGSRDLFMK LGAEGLSKWI LEQKKLLITD TTMRDAHQSL LATRVRTYDL LKIAEPTSYL GAGLFSLECW GGATFDVSMR FLKEDPWQRL HKLSEAIPNI LFQMLLRGSN AVGYTNYPDN VVQRFVEEAA ASGVDIFRVF DSLNWTRGMT VAMEAVRKTG KICEAAICYT GDITDPKRDK YPLEYYVAMA KELEQMGAHI LAIKDMAGLL KPMAAHKLVK ALKENIGIPV HLHTHDTSSN GNATLLMACQ AGVDIVDAAL SSISGLTAQP NLNALLAALK GTEWDPALDD EGLQHLANYW ETVRDYYTPF ESGLKSGTAE VYHHEIPGGQ YSNYKPQVAG LGLLDRWEEC KEMYFKVNRL FGDIVKVTPS SKVVGDMAMF LVKNNLDVDD VFTKGDELSF PESVVGMFKG MLGQPYQGWP AELQKIILKG EEPITCRPGE LLEPADFEEK RLEAETKVGH AVNDKDLMSY LLYPHVYPEF DKHRQEYSDT SVIPTPIFFY GLEPGQETSI DIEPGKTLII KLNAVGKVHP DGTRHIFFEL NGQQRQVVVR DQSVQTDEAE REKADKGNAK HIGAPMPGKV LKLNVKAGDV VKAGDVLMVT EAMKMETNIK AKEDGAVAEV KFKEGDKVEK EDLVIVMA
|
| |