Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2387 |
Symbol | |
ID | 2685695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2616355 |
End bp | 2617035 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637127077 |
Product | B12-binding domain-containing protein |
Protein accession | NP_953433 |
Protein GI | 39997482 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.543009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACAGT CCCTGACCAG TGAGCACGAA GAGCTGCTGC GTCTCATTGT CGACGCCGAC CGTGACGGCG CCAATGCACT GATCGACCGG TGGGCGGACG AACACGGCTA CACCAATGCC CTCAGCGACC TGCTGGAGCC CGTGCTGCGC GAGATCGGTG ATCGGTGGGG AAGGGACGAG ATCAGTCTTG CCCAGGGGTT CGTGGCGGGC AAGATCGCCG AGGATACGCT GACCAAGGCG CTGGCCTCCG CCGACGGCAG CGGGCGCCCG CCGGTCCGGG GACCCGTGGT CGTCGGCAAC ATCGAGGACG ATTTTCATTC ACTGGGGCGG AAGATGGTCG TCACCTTCCT GCGGGCGGCC GGCTGGCAGG TGATCGACTT GGGCAACGAT GTTCCCCCCC ACGAGTTCAT TGCCCGGGCC GTGGAGAGCG ATGCGCGGAT CATCGGCGTT TCCGCCATGA TGCTCGTCAC GGCGCGCACG ATCCGCCAGG TCCGCGACGA ACTGGACCGT CTGGGGCTTT CCGGCCGTGT GCAGCTTGCC GTGGGGGGCG CCGTGTTCAA GCTCCGGCCG GAGCTGGTGG CTGAAGTGGG CGGAGACGGC ACTGCCGACA GCGCCCTGGC CGCGCCGACG CTGTTCGATG AATTGTGGCG CCGCGCCCAT GACCGGAGTG ATGCGGCATG A
|
Protein sequence | MEQSLTSEHE ELLRLIVDAD RDGANALIDR WADEHGYTNA LSDLLEPVLR EIGDRWGRDE ISLAQGFVAG KIAEDTLTKA LASADGSGRP PVRGPVVVGN IEDDFHSLGR KMVVTFLRAA GWQVIDLGND VPPHEFIARA VESDARIIGV SAMMLVTART IRQVRDELDR LGLSGRVQLA VGGAVFKLRP ELVAEVGGDG TADSALAAPT LFDELWRRAH DRSDAA
|
| |