Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2384 |
Symbol | |
ID | 2686581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2612913 |
End bp | 2614757 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637127074 |
Product | sensor histidine kinase |
Protein accession | NP_953430 |
Protein GI | 39997479 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGAGC CGATTGTTGA GCGGGATCAG AACGCGTTCC ACTTCCTTTT TCTGGAATTG CTGGAGAACG TGCTTAAGTT GGCGGAGAAT CCCGGCCGGT GCGGCGCGTA TCTGACTGCC CAGATCCGCG AGCTGGTCGG GGTTCGGACC GTGGCGCTCC TGCAGTGCGT CCCCAAAGCC CCCGAAGGGT GGCATGATCT GGTGAGCATC TGTCCCGAGA GGCGCCGGGG CGAGATCCCG CCGGAGTCCC TCGAACAGCT GGCTTTCCTG AGTCACGAAA TGGAGGGGCC GGAACTCTGG TCGCCGGCGG GCCCGCCGGA TCGGGGGGGC GCGGTGCTGG CTGCCCTCGG CTACGGCGAT TCGCTCATCC TTCCCCTCAA CGTGGGGAGA CAGCGGGTGG GGGTGCTTCT GCTGCTCGAC GTCATGGACC GGGCCGGCAT CCAGACCATT ACGGCATCAC TGGAACGGCT CGCCACGGTC CTCGCGCTGA TCTTCCGCAA TGCCGTCCTC TACCGCGACC TGGAGCGGCA GGTGGTGTCG CGGACCCACG ACTTGCTCTG GCGCGCGGAG GTTGATCGGG CACTGGCGGA ACTCTATCCC TGCTTGATCT CCCCCGATGT CGACATTGAG GAGATCACCA CCCGCATCCT GGAAGAGGCA ATGGGGCTCA CCGGGAGCGA GCAGGGCTTC GTGGCCACCA TCGATCCGCT GTCGCGGACC CTGGTGATCC ATACGTTTTC CTCTATGATG GACTGCCTCT GGCAGGGGGG GGAGGAGGGG CGGAGAATCC TGTTTCCGCC CGGCCAGGAT GGTTCCTATC CGACCCTCTG GGGCCACTCG CTCAATACGA AATGTCCCTT CTACACCAAT GATCCCGCCG GCCATCCCAG CGCCGTGGGG GTACCGCACG GGCATATCCC GCTCCGGCAC TTCCTGTCGG TGCCGGTCAT GCTCGGCGAC GAGGTGGTGG CCCAGATTTC CCTGGCCAAT CCCGGCCGGG ACTACACCGA GCGCGACCTG GAAGCCATCG GCCGCGTGGC CAAGTTCTTC GCTCTGGCCA TCCAGCGGAT GCGGGCCGAG GAGTCGATCC GGGTTCTGAA CACGGAGCTT GAGCGGAGGG TTGAGGAGCG TACCAACCAG CTCACCGTGT CCAACCATGA GCTCGAATCG TTCTGCTACT CGGTCTCCCA CGACCTGCGG GCGCCCCTGC GCCATATCAA CAGCTACGGA ACCTTTCTGC TGGAAGATTA CGGCTATCTG CTGGACGACC AGGGGCGCGA GTACCTGGCG CGGCTCCAGG CCGCCACGCG CCGGATGGGC TCCATTATCG ACGACCTGCT GACCCTGTCA CGGGTCTCCC GGACCGAGCT GACCGAAGAG GTAACGGACC TGAGCCGCCT GGCCCGCGAC ATCATCGATA CCCTGCGGGA GACCGAACCC GGGCGCTGGG TCGATGTCAC GATCGAGGAG GGGCTGGCGG CCACCGGCGA CCACACGCTG CTGCCGCTGC TGCTCCAGAA TCTCCTGCAG AATGCCTGGA AATACACCTC GCGCGTCGAG CGCGCCGTTA TCCGCTTCGG CCGGTGGTAC CAGGAGGGTG AGCCGGTCTT CTATGTGTCG GACAACGGCG CCGGCTTTGA CATGACCCAT GCCGACAAGC TCTTCAAGCC GTTCGAGCGC CTCCATGCCG CCTCCGAATA TGAGGGAACC GGCGTCGGCC TTGCCACGGT CCACCGGATC GTCCTCCGTC ATGGCGGCCG CATCTGGGCC GAGAGTGAGC CCGGTAAGGG GGCAACATTC TGTTTCACCT TGCCCGGCGC CTTTTCCACC TGCGCCGTTT CTTGA
|
Protein sequence | MAEPIVERDQ NAFHFLFLEL LENVLKLAEN PGRCGAYLTA QIRELVGVRT VALLQCVPKA PEGWHDLVSI CPERRRGEIP PESLEQLAFL SHEMEGPELW SPAGPPDRGG AVLAALGYGD SLILPLNVGR QRVGVLLLLD VMDRAGIQTI TASLERLATV LALIFRNAVL YRDLERQVVS RTHDLLWRAE VDRALAELYP CLISPDVDIE EITTRILEEA MGLTGSEQGF VATIDPLSRT LVIHTFSSMM DCLWQGGEEG RRILFPPGQD GSYPTLWGHS LNTKCPFYTN DPAGHPSAVG VPHGHIPLRH FLSVPVMLGD EVVAQISLAN PGRDYTERDL EAIGRVAKFF ALAIQRMRAE ESIRVLNTEL ERRVEERTNQ LTVSNHELES FCYSVSHDLR APLRHINSYG TFLLEDYGYL LDDQGREYLA RLQAATRRMG SIIDDLLTLS RVSRTELTEE VTDLSRLARD IIDTLRETEP GRWVDVTIEE GLAATGDHTL LPLLLQNLLQ NAWKYTSRVE RAVIRFGRWY QEGEPVFYVS DNGAGFDMTH ADKLFKPFER LHAASEYEGT GVGLATVHRI VLRHGGRIWA ESEPGKGATF CFTLPGAFST CAVS
|
| |