| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2379 |
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| Symbol | |
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| ID | 2688048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2607448 |
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| End bp | 2608803 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637127069 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | NP_953425 |
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| Protein GI | 39997474 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.20256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTA AAATAGTGCT GGACGAAAGC CGCATCCCGA CCCACTGGTA CAACATCATC
CCCGACATGC CCGGCCCCCT GGCGCCGGTC ATCAACCCCC GCACCCTTCA GCCGGTGACC
CCCGACGACC TTCTCCCCAT CTTCCCCATG GCCATCATCG AGCAGGAGAT TTCGGGCGAA
CGGTGGATTC CGATCCCGGA AGAGGTGCGG GAGATCTACC GCCTCTGGCG GCCGTCTCCC
CTCTACCGTG CCCACCGGCT GGAGCAGGCC CTCGGCACCC CGGCGAAGAT CTACTACAAA
TACGAAGGGG TGTCCCCGGC CGGCTCACAC AAGCCCAACT CCGCCATCCC CCAGGCGTAC
TACAACAAGC AGGCGGGCAT CCGGCGGCTG GCCACCGAGA CCGGCGCCGG GCAGTGGGGG
AGTTCCCTGG CCCTGGCCTG CTCCATGTTC GGCCTGGAGT GCACGGTCTA CATGGTCAAG
GTGTCGTGCA CCCAGAAGCC GTACCGCAAA AGCATGATGC AGCTCTGGGG GGCCAACGTG
ATCCCGTCGC CGTCCGAGTT CACCAACGCC GGGCGCTCCA TCCTGGCCCA CGATCCGGAC
AGCAACGGCA GCCTCGGCAT CGCCATCTCC GAGGCGGTTG AGGATGCCGC CTCCCGCGCC
GACACCAACT ATGCCCTGGG CAGCGTTCTG AACCACGTCT GCCTCCACCA GACCATCATC
GGCCAGGAGG CCAGGGAACA GCTGGCCCTG GCCGGCGACT ACCCCGACGT GGTCATCGCC
TGCTGCGGCG GCGGCTCCAA CTTCGCCGGC ACGGCCTTCC CGTTCCTGGC CGACCGGGCC
GCCGGCAAGA ACGTCCGCTG TCTGGCCGTG GAACCCGCCT CGTGCCCGAC CCTGACCAAG
GGGATCTACG CCTTCGACTA CGGCGACACC GCCAAGATGG CCCCCATCGC CATGATGTAC
ACCCTGGGGC ACGACTTCAT GCCGCCCGGT ATCCACGCCG GCGGGCTGCG CTACCACGGC
GAGTCGCCCC TGGTGTCGCA ACTCCACCAT GCCGGCCTCA TCGAGGCCAA GTCGTACCGC
CAGACCGCCT GTTTCGAGGC AGCCCACCTC TTTGCCCGGC ACGAGGGGAT CGTGCCGGCC
CCCGAATCGT CCCACGCGGT GCGGGCCGCC ATTGACGAAG CAGTCATCGC CAAGGAGGAG
GGGAAGGAAA AGACCATTCT CTTCTGCCTC TCGGGCCACG GCCAGCTGGA CATGGTGGCC
TACGACGCCT ACCTCTCCGG CGGCCTGGAA GACGTCGAAT ACCCCGAGGA GATGATCCGG
GAGTCCCTGG CCAAACTGCC CAAGGTGGAA CTGTGA
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| Protein sequence | MQTKIVLDES RIPTHWYNII PDMPGPLAPV INPRTLQPVT PDDLLPIFPM AIIEQEISGE
RWIPIPEEVR EIYRLWRPSP LYRAHRLEQA LGTPAKIYYK YEGVSPAGSH KPNSAIPQAY
YNKQAGIRRL ATETGAGQWG SSLALACSMF GLECTVYMVK VSCTQKPYRK SMMQLWGANV
IPSPSEFTNA GRSILAHDPD SNGSLGIAIS EAVEDAASRA DTNYALGSVL NHVCLHQTII
GQEAREQLAL AGDYPDVVIA CCGGGSNFAG TAFPFLADRA AGKNVRCLAV EPASCPTLTK
GIYAFDYGDT AKMAPIAMMY TLGHDFMPPG IHAGGLRYHG ESPLVSQLHH AGLIEAKSYR
QTACFEAAHL FARHEGIVPA PESSHAVRAA IDEAVIAKEE GKEKTILFCL SGHGQLDMVA
YDAYLSGGLE DVEYPEEMIR ESLAKLPKVE L
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