Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2371 |
Symbol | trpA |
ID | 2686600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2598080 |
End bp | 2598874 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637127062 |
Product | tryptophan synthase subunit alpha |
Protein accession | NP_953418 |
Protein GI | 39997467 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0243163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGAA TTGCCGGCAC ATTTGCCGAA TTGAAGCACA ACAGCCGCAA GGCCCTCGTT ACCTTCATCA CCGCCGGTGA CCCGGACCTG GCCGCCACGG AAGCGCTGAT TCCGCTTCTG GCTGAAAGCG GCGCCGACAT CGTGGAACTT GGCGTTCCCT TTTCGGATCC AATGGCCGAC GGCCCCACCA TCCAGCTTTC TTCCGAGCGG GCCCTTGCTG CGGGGACGAC CCTGCCGAAG ATCCTCGACA TGGTGCGCCG GGTCCGTACC CGCTGCCAGG TGCCCATCGT GCTCATGGGC TACTACAATC CGATTCTGAT CCACGGCCTT GAGCGCTTTG CGGCGGATGC CTCGGCCGCG GGGGTCGACG GCGTGCTCCT GGTTGACCTT CCCCCGGAGG AGGCGGCCGA GTTCAAGGCA TGTGCCGACC GCCACGGGCT CGATGTTATC TTCCTTCTCA CCCCCACCTC CGACGAAGGG CGCATCCGGA AAGTGGCGCG GCAGGCCCGC GGGTTCGTCT ACTATGTGTC GGTGACCGGC GTGACCGGCG CGCGGAGCGG CGTGGAGGCG TCCGTTTCCT CCAACGTGGC CGCCATTCGC GAGGCGATCA CCGTGCCGGT CGTGGTCGGC TTCGGCATCT CGACGCCTGA CCAGGCTGCC CAGGTGGCCG CCTCGGCCGA CGGCGTGGTC GTGGGGAGCG CCATTGTAAA ATTGTTCGAG CGTTTCACGG CCGCCGAGCT CGGGCGTGAG GTCGCAACCT TCGTTTCCGC GCTGCGCGAA GCGATCGGAA ATTGA
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Protein sequence | MSRIAGTFAE LKHNSRKALV TFITAGDPDL AATEALIPLL AESGADIVEL GVPFSDPMAD GPTIQLSSER ALAAGTTLPK ILDMVRRVRT RCQVPIVLMG YYNPILIHGL ERFAADASAA GVDGVLLVDL PPEEAAEFKA CADRHGLDVI FLLTPTSDEG RIRKVARQAR GFVYYVSVTG VTGARSGVEA SVSSNVAAIR EAITVPVVVG FGISTPDQAA QVAASADGVV VGSAIVKLFE RFTAAELGRE VATFVSALRE AIGN
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