Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2361 |
Symbol | |
ID | 2685758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2585158 |
End bp | 2588493 |
Gene Length | 3336 bp |
Protein Length | 1111 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637127052 |
Product | alpha amylase family protein |
Protein accession | NP_953408 |
Protein GI | 39997457 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.124946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCA GGACACCGCT GTCGGACGAC ACCCCCCTCT GGTACCGGGA CGCCGTCATC TACCAACTCC ACGTGAAGGC CTTCGCCGAT TCCGACGGCG ACGGCGTGGG GGACTTCCGG GGCCTCATGG GGAAGCTCGA TTATCTCCAG TCCCTGGGGA TCACCGCCAT CTGGATACTT CCCTTCTACC CGTCCCCCTT GCGCGACGAC GGCTACGACA TTGCCGACTA CTACAACGTC AACCCCAGCT ACAACACCCT GCGCGAATTC CGGGAATTCC TCAGGGAGGC CCATGCCCGC CGCATCCGGG TCATCACCGA GCTGGTCCTC AACCACACCT CGGACCAGCA CCCCTGGTTC CAGCGTGCCC GCCGGGCAAA ACCGGGCTCG GTCCACCGGG ACTACTACGT CTGGAGCGAT ACCCCCGACC GGTACCGGGA AACCCGGATC ATCTTCCAGG ACTTCGAGAC GTCCAACTGG AGTTGGGACC CGGTGGCCAA GGCCTACTAC TGGCACCGGT TCTATTCCCA CCAGCCCGAC CTCAATTTCG ACAACCCCCG GGTCCAGTCG GAAGTGCTCC GGATCATCGA CTACTGGCTG GGGATGGGTG TGGACGGCGT CCGGCTGGAT GCCGTCCCCT ACCTCTTCGA GCGGGAAGGA ACCAACTGCG AAAACCTGCC CGAAACCCAT GACTTCCTGA AAAGGCTCCG GGGACACATG GACGCCTCGT TCCCCAACCG GATGCTGCTG GGCGAGGCCA ATCAATGGCC CGAGGACGCG GTGGCCTATT TCGGCGAGGG GGACGAGTGC AACATGCTCT TCCACTTCCC GCTGATGCCC CGCATGTACA TGGCCATCGA GATGGAGGAC CGCTTCCCGG TGGTCGACAT CCTCGACCAG ACCCCCGCGA TCCCCGAGGG ATGCCAGTGG GCCATCTTTC TCCGCAACCA CGACGAGCTG ACCCTGGAGA TGGTGACCGA CGAGGAGCGG GACTACATGT ACCGGATCTA CGCCTCGGAC CCCAAGGCCA GGATCAACCT GGGAATCCGG CGGCGGCTGG CGCCCCTCCT CGGCAAGGAC CGGCGGCGGA TCGAACTCAT GAACGCCCTG CTCTTCTCCC TGCCCGGCAC CCCCGTCATC TACTACGGCG ATGAGATCGG CATGGGGGAC AACTACTACC TGGGGGACCG CAACGGCGTC CGTACCCCCA TGCAGTGGAG CCCCGACCGC AATGCCGGTT TTTCCGGCGC CAACCCCCAG CGCCTCTTCC TGCCGGTCAT CATCGATCCC GAATACCACT ACGAAGCGGT AAACGTGGAC ATCCAGGAGC GCAACCCCAC CTCGCTGCTC TGGTGGATGC GGCGCATCAT CGCCGTGCGC CGCCGCTACC GGGCCTTCAG CCGCGGCGCC ATGGAGATGC TCTATCCGGC CAACCACAAG GTCCTGGCCT TTCTCCGCCG CCACGAGGAT GAAGTGATCC TCGTGGTGGT CAACCTCTCC CGCTTCGCCC AGGCCATCAA CCTGGACCTT CAGGAATTCG CCGGCATATC CCCCGAAGAC CTCTTCAGCC GGAATCGCTT CCCGGTCATC CGCGAAGCCA CCTATCCCCT CACCCTGGGC CCCCACGACC ACTTCTGGTT CCTGCTGCGG CGCAGGGAAG CGCCGCTTCA GGCCGAGGAA GAACTGCCGC GGATCAGGCT TCGGGGAGAA CTCCCCTGGT GGGAGACTCT CCGCCAGACC AGGGGCGACG CTCACCTGGA ACGGGTGACC ACCGATTACC TCAAGCGAAG CGGTTGGTTC CGGGGAAAAG CGAGGGCAAT CATCGGCTAC GTGCTGCGCG ACACCGTGCT CCTGCGGCAG GGGGAACGGG TGTTCCCCAT CTTCTTCCTT GAGGTACGCT ACCAGGACGG CCCGCCGGAA ACCTACCTGA TTCCCGTGGC GTTCCTCACC GGTGCCGGAG CGAAACGGGT AAGCGCCGAA TCCCCCCGGG CGGCCATAGC CGCTCTTTCC GTGGGGGACG AAGAGGGCAT TCTCTGCGAT GCGGTCCATG ACCGGGAATT CAGGGACGCG CTCCTTGCCC TGGCACTCGG CCGTCGCCGG CTCCATGGCG AGGAAAACAG TCTCATCGTG CCGGTTCACG CCGGAGCAGG ACGCATCGGC TCCAGGGAAG AGATGCGTCA TCTCGCCTCC GAACTCCCCA AGGCGGAACA GACCAACAGC ATCATCACCT ACGGCGATCG CCACGTGCTC AAGCTCTACC GCAAGGTGGA GCCGGGCATC AATTCCGAGG TGGAGATGGC GCGGTTCCTC ACCGCAAAAT CGAGCTACCC CAACGTTGCC CCCTTCCAGG GGAGCCTGGA ATTGCGGCAT CCCGGCGTCG AGCCGGGCGC TATCGGCCTG CTCCAGGGAT ACGTACAGAA CCAGGGCGAC GGCTGGCGAC TCTCCCTCCA CCTCCTGGGC CAGTACTTCG AGCGGATTCT CTCGTGCCGG GGCGAGCTGC CACCGCCGCC GTCGCGTTTT TCGAGCCTCA TGGACGGCAG CGCCTGCACC GTGCCGGAAC CGGCGGCGGA GCTCATCGGC GGCTTTTATT TGGAGATGGC TGGACTTCTC GGCCGCCGGA CCGCCGAGCT CCACTTGGCC CTCGCCGCCG GGGGAAACGA CCCGGCTTGG CGGCCCGAGG AGTATTCCAC CCTCTACCAG CGCTCCGTGT ACCAGTCCAT GCGCAACCAG GCCCGACGCA GCCTCCAGCT CCTGGCCCAG CACCACAAGG ACCTGCCCGC AGAGGCGTTG GCATCGGCCG ACAGGATTCT GAGCGCGGAA AAGGAACTTC TCGCCTGTCT GCGTCCCATC GTCGGCCGGC GGATTCAGGC CATGAAGAGC CGCATCCACG GCAACTTCAG GTTGGAAAAG GTTCTCTTCA CCGGCAAGGA CTTCATGATA ATCGACCTGG AGGGCGAGCC GGACCGGCCC CTCGGCGAGC GCCGCATCAA ACGCTCCCCC CTGCGGGATG TGGCGGGAAT GATCCGCTCC TTCCACAACG CCACCCTGAC GGCCCTTGCC CGCCACGGCG CTGGCCATCC CGGCGACATC CCGCTCCTGG AGCCCTGGGC GGAGGCCTGC TGGTATCACG TGAGCTGCCG CTATCTGGCC GGCTACCTGG AGCAGATGGG CACAAGCCCC CTCGTCCCGA CGGAGCGGAG CGACCTCGAG ACCCTCCTCC GCTCGTTCCT GCTGGACAAT GCCCTCCACG AACTCGGCTA TGCCCTCGCC AACCGCCCCG AACGGGTTTC CTCTTACCTG CGCGGGGTCG AGACGGTGCT GCGGGAGTTC CGGTAA
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Protein sequence | MARRTPLSDD TPLWYRDAVI YQLHVKAFAD SDGDGVGDFR GLMGKLDYLQ SLGITAIWIL PFYPSPLRDD GYDIADYYNV NPSYNTLREF REFLREAHAR RIRVITELVL NHTSDQHPWF QRARRAKPGS VHRDYYVWSD TPDRYRETRI IFQDFETSNW SWDPVAKAYY WHRFYSHQPD LNFDNPRVQS EVLRIIDYWL GMGVDGVRLD AVPYLFEREG TNCENLPETH DFLKRLRGHM DASFPNRMLL GEANQWPEDA VAYFGEGDEC NMLFHFPLMP RMYMAIEMED RFPVVDILDQ TPAIPEGCQW AIFLRNHDEL TLEMVTDEER DYMYRIYASD PKARINLGIR RRLAPLLGKD RRRIELMNAL LFSLPGTPVI YYGDEIGMGD NYYLGDRNGV RTPMQWSPDR NAGFSGANPQ RLFLPVIIDP EYHYEAVNVD IQERNPTSLL WWMRRIIAVR RRYRAFSRGA MEMLYPANHK VLAFLRRHED EVILVVVNLS RFAQAINLDL QEFAGISPED LFSRNRFPVI REATYPLTLG PHDHFWFLLR RREAPLQAEE ELPRIRLRGE LPWWETLRQT RGDAHLERVT TDYLKRSGWF RGKARAIIGY VLRDTVLLRQ GERVFPIFFL EVRYQDGPPE TYLIPVAFLT GAGAKRVSAE SPRAAIAALS VGDEEGILCD AVHDREFRDA LLALALGRRR LHGEENSLIV PVHAGAGRIG SREEMRHLAS ELPKAEQTNS IITYGDRHVL KLYRKVEPGI NSEVEMARFL TAKSSYPNVA PFQGSLELRH PGVEPGAIGL LQGYVQNQGD GWRLSLHLLG QYFERILSCR GELPPPPSRF SSLMDGSACT VPEPAAELIG GFYLEMAGLL GRRTAELHLA LAAGGNDPAW RPEEYSTLYQ RSVYQSMRNQ ARRSLQLLAQ HHKDLPAEAL ASADRILSAE KELLACLRPI VGRRIQAMKS RIHGNFRLEK VLFTGKDFMI IDLEGEPDRP LGERRIKRSP LRDVAGMIRS FHNATLTALA RHGAGHPGDI PLLEPWAEAC WYHVSCRYLA GYLEQMGTSP LVPTERSDLE TLLRSFLLDN ALHELGYALA NRPERVSSYL RGVETVLREF R
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