Gene GSU2358 details

Gene Information

• Locus tag: GSU2358
• ID: 2686146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 2577762
• End bp: 2579654
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637127049
• Product: isoamylase family protein
• Protein accession: NP_953405
• Protein GI: 39997454
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme
• TIGRFAM ID: [TIGR02402] malto-oligosyltrehalose trehalohydrolase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.330198
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCCGT GGTGCCTGGA TATCGGAGCG ACGCCCGTCA CCGGAGGAGT TCACTTCAGG 
GTTTGGAGCC CCCTGGCCGA TTCCGTCGAG GTCATCCGCT GTGCCCGGGG CGAAGAAGCC 
TCGTGCCCTC TTTCCCGGGT CGGCGAATAC TTTCAGGGGA CCATACCGGG CATGGGTCCG 
GGCGACTGTT ACTGGTACCT GCTGGATGGC ACCCTTCGCC GGCCAGACCC GGCATCCCGC 
TGCCAACCCG GGGGAGTTCA CGGCCCCTCC CAGGTCGTGG CGCCGGACAG CTTCGCCTGG 
GCCGATGGCC AGTGGCGGGG AGTGGCGCTG GAGGAACTCA TCACCTACGA ACTGCACGTG 
GGGACCTTTA CGCCCGAGGG GACCTTCGGT GCGGCCGTGG AGCGGCTGGA TTATTTGCAG 
GAACTGGGAA TCACCGCCCT GGAGCTGATG CCGGTGGCCG AGTTTCCGGG CAGCCGCAAC 
TGGGGGTACG ACGGAGTATT CCCCTTTGCC CCCCACCACG CGTATGGCGG CCCCGACGGT 
CTCAAGTCGC TGGTGGATGC GTGCCACCGG CGGGGGCTGG CCGTGATCCT GGACGTGGTT 
TACAACCACC TGGGCCCCGA GGGCAACTAT CTTCACGCCT TTGCCCCCTA CTTCACCGAT 
CACTACCGGA CCCCCTGGGG GGATGCCGTC AATTTCGACG GACCCGGCAG CGACGGGGTG 
CGCCACTACG TGATCGGCAA CGCACTCCAC TGGATAAGCG AATACCATCT GGACGGCCTG 
AGGCTCGACG CCATCCACGG CATCTATGAC TTCAGCGCCG GCCACATCCT GCGGGACATT 
ACCCGGGCGG TCGACTCCCT GGCACGGCAC CTGGGGCGGA CGGTCCACGT GATCGCCGAG 
AGCGACCTGA ACGATGTGCG GACCATCGCG CCGCCGGAGT CAGGCGGGCA CGGCGTCCAC 
ACCCAGTGGT GCGACGATTT CCACCACTCC CTGGTGACCC TCCTGACCGG CGAGCGGAAT 
GGTTACTACG CCGATTTCGG CCTGTTCAGC CACCTGGAGA AGGCGTTCCG CGAGGGGTTC 
GTCTACTCCG GAGAATACTC GCGCCACCGC AGACGCCGCC ACGGCAGCCC ATCAGGGGAT 
CAGCCCCCGC GCCGGATGGT GGTCTTTTCC CAAAACCACG ACCAGATCGG TAACCGGGCC 
CTGGGGGACC GGCCATCGAC CCGCCTCTCC CCGGAGCAGC TCAAGCTGGC CGCCGGCGCA 
GTCATACTCT CCCCCTACCT GCCGCTCATC TTCATGGGAG AGGAGTACGG CGAGACTGCC 
CCGTTCCCCT ACTTCACGAG CCATGGCGAT CCGGCGCTGG TTGAGGCGGT GCGCCGGGGA 
CGGCGCGAAG AATTCGCCGC CTTCGGCTGG GAGGCGGAAG TCCCCGACCC CCAGGACGAA 
GCGACATTCC GCTCCGCCCT GATCGATCCG GAACTTCGCT CCGTCGGCTG GCACCAGCAG 
GTATTCTCCT TCTACCGGGA AGTGATCCGG CTCCGGCGGC AACTGCCCAG CTTCCGCCGC 
CCCGAGCGGG AGGAAATCCA GGTGACCGGC CTGGAAGCGG ACAGGGTCGT GGTCGTCCGG 
CTCTGCCGGG GCCAGGCCGA ACTCGTGGTC CTCTTTGCCC TGGCCGAAAC ATCCTGCCGC 
GTTCGACTAC CCTTCCGCCA CGGACGTTAC CGCAAACTCT TGGACTCGGC CGAACCGCGC 
TGGGGCGGAC CGGGGGCACT GGCGCCCGAA GCCCTCGACG GAGGGGATGA AGGGATCGGG 
ATCACCCTCG CGCCGTTCAG CGTCGTTCTG TATGGCAGGG ACCGAGACGA CCGTCGCCGG 
AACGGCGGCC CGATGCCGAC TGAAGAAGGG TGA 

 

Protein sequence

MTPWCLDIGA TPVTGGVHFR VWSPLADSVE VIRCARGEEA SCPLSRVGEY FQGTIPGMGP 
GDCYWYLLDG TLRRPDPASR CQPGGVHGPS QVVAPDSFAW ADGQWRGVAL EELITYELHV 
GTFTPEGTFG AAVERLDYLQ ELGITALELM PVAEFPGSRN WGYDGVFPFA PHHAYGGPDG 
LKSLVDACHR RGLAVILDVV YNHLGPEGNY LHAFAPYFTD HYRTPWGDAV NFDGPGSDGV 
RHYVIGNALH WISEYHLDGL RLDAIHGIYD FSAGHILRDI TRAVDSLARH LGRTVHVIAE 
SDLNDVRTIA PPESGGHGVH TQWCDDFHHS LVTLLTGERN GYYADFGLFS HLEKAFREGF 
VYSGEYSRHR RRRHGSPSGD QPPRRMVVFS QNHDQIGNRA LGDRPSTRLS PEQLKLAAGA 
VILSPYLPLI FMGEEYGETA PFPYFTSHGD PALVEAVRRG RREEFAAFGW EAEVPDPQDE 
ATFRSALIDP ELRSVGWHQQ VFSFYREVIR LRRQLPSFRR PEREEIQVTG LEADRVVVVR 
LCRGQAELVV LFALAETSCR VRLPFRHGRY RKLLDSAEPR WGGPGALAPE ALDGGDEGIG 
ITLAPFSVVL YGRDRDDRRR NGGPMPTEEG