Gene GSU2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2288 
Symbol 
ID2686924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2505004 
End bp2506566 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content59% 
IMG OID637126981 
Productsensor histidine kinase 
Protein accessionNP_953337 
Protein GI39997386 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCTC CCCTTGCCAT CGCCAAGGAA AAACTCTCGG CGAGGATTTT CCTCTCGTTC 
GGTCTCCTGT TCCTTGTCGT GGTTTTCTTC TTTGCCGGTT TCTATCTCTT TGACCGTTGG
CAATTGGCCC GCGAGGCATT CATGCGGGAG GGAACCTCTC TTGCACGAGT GCTCGCCTTC
AATGCCCGGA TCGGTGTCGT TACCCACAAT CAAGGGTTCA TCAAGGGTGC CCTTGACGGG
GTGACCTCTT ACGAAGGGGT GGTGTCTGCC GGGGTCTATT CCCCTGAAGG GAAGCCGATC
CTCGAAGAGC GTGGAGCGCT GGACAACGCA TCTCCGCCGC GCCCACTACC GCCTGAAGCG
AAGGGGGCGC TGAAAATGTC TCCCGGCCCC ATCCGGTTCG AAACAGCGAC TTCCGTTGAA
TTCTGGGCGC CAATCATTCT GGAGGCGGGC AGCTTTTCCG AGGAGGAACT TTACTTCGGT
GCAAGCTCCC AGGATATTCA CGAACGCACC ATAGGTTTCG CCCGGGTGAT CTTCGACAAG
GGGAGCGTTA CCAATGCCTT CAGGTTTCTG GTGGTCAACA GCGTTCTGAT TGCCCTGGCG
GCAATTATTC TCTGGGGCAT TCTCGCCTAT GTCATCGGCC GCAAGGTTAC CCGGCCCCTC
GATCGGCTAA CGGACGGAGT CCGTGCATTG CGCGACGGCG ATTTCAGAAA AGTCGACGTC
GTGACCTCCG ACGAGGTGGG ACGGTTGGCG GGCGCATTCA ACGGGATGGT GACCGCCCTG
GAACAGCGCG AAGCGGAACG CAGCAAGGCC CAGGAGGCGA TCAGCGCCCT CAATAACGAG
CTGGAGCAGC GTGTCATCAG GCGAACAGCA GAACTTGAGA AGGCCAACCG GGAGATGGAG
TCGTTCAACT ATTCGGTTTC CCATGACCTG CGCGCCCCGC TGGTAAGGCT CAAGGGATTC
TGCCTGGCGC TGGAAGAGGA TTTCAGCGAC AAGCTGGACA GCGCCGGCCG GTTCTATCTT
GAGAGGATCA TGTCCACCTG CGACCAGATG GGGCGTGTCG TCGCCGCGAT CATGAGCCTC
ACTCAGGTGA GCCGTGGCGA GCTCTGCCGT GAAAAGGTGA ATCTGAGTGC CATGGTTGAA
CGCATCATTG CCGATCTGCG GGAGAGCGAG CCCCAGCGGC GCGTGGCCGT GATCATCGAG
CCCGGCGTCC ACGTGGACGC CGATCCTCGC CTGGTTTCGG TGGTCCTCGA CAATCTCGTG
GGCAACGCCT GGAAGTTCAC GGGGAGCAAG CCTGAAGGGC TCATCGAATT CGGGGCGGTT
GCATCCGCCG AAGGGGCGTT TTTCATCCTC GACAATGGTG CTGGATTCGA TATGGCCTAT
GCCGAGCGGC TCTTCCGCCC CTTTGAACGT CTTCATGGCC ATGACGAATT TCCCGGCACC
GGCGTGGGGC TTGCATTGGT TAAAAGAATT GTCGATCGCC ATGGCGGTTA TGTTAGAATC
GACAGCAGTG AAGGAAAAGG AACTATGGTT GTCTGCTCGT TCCAGTCTTC GGATATGGGT
TGA
 
Protein sequence
MRSPLAIAKE KLSARIFLSF GLLFLVVVFF FAGFYLFDRW QLAREAFMRE GTSLARVLAF 
NARIGVVTHN QGFIKGALDG VTSYEGVVSA GVYSPEGKPI LEERGALDNA SPPRPLPPEA
KGALKMSPGP IRFETATSVE FWAPIILEAG SFSEEELYFG ASSQDIHERT IGFARVIFDK
GSVTNAFRFL VVNSVLIALA AIILWGILAY VIGRKVTRPL DRLTDGVRAL RDGDFRKVDV
VTSDEVGRLA GAFNGMVTAL EQREAERSKA QEAISALNNE LEQRVIRRTA ELEKANREME
SFNYSVSHDL RAPLVRLKGF CLALEEDFSD KLDSAGRFYL ERIMSTCDQM GRVVAAIMSL
TQVSRGELCR EKVNLSAMVE RIIADLRESE PQRRVAVIIE PGVHVDADPR LVSVVLDNLV
GNAWKFTGSK PEGLIEFGAV ASAEGAFFIL DNGAGFDMAY AERLFRPFER LHGHDEFPGT
GVGLALVKRI VDRHGGYVRI DSSEGKGTMV VCSFQSSDMG