Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2230 |
Symbol | holB |
ID | 2687562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2445628 |
End bp | 2446599 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637126923 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | NP_953279 |
Protein GI | 39997328 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.688016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTTT CCCGGGTCCT CGGCCAGGAA ACCGCCGTGA ATGTCCTGCA ACGCGCGCTC CGTTCGGGCA AAACGGCCCA CGCCTACCTT TTCGAGGGGA TCGAGGGGTG CGGCAAGATG ACCACCGCCC TCGCCTTCAT CGAGGCAGCC TTCTGCCGGC GGGATGACGG CTGCGGTTCA TGCCCCTCCT GCCGGAAAAT GGCCGGACTC CAGCATCCGG ACCTGCACCG ACTGGCTCCC GAGGGTGCAT TCATCAAGAT CGACCAGGTA AGGGAACTGC AGCGGGAGCT TTCCCTGCGT CCGGTTGAGG CACCGATGAA GGCATGCATC ATCGATGATG CCGACCGGCT CAACCCGGCA GCGGCCAACG CGCTGCTCAA GACGCTGGAA GAACCGCCGG GCAATGCACT TCTGATCCTG CTCACCACGA ATCCGGCGGG AATTCTCCCC ACGGTCCGTT CCCGCTGTCA GCTCCTGAGG TTTTCGCCGC TCCCCGAGCG GGTGATCGAA GAATACCTGA CGGACGCCGG CCGGGAACCG GCCGCAGCCC GCCTGGCCGC ATCCCTGGCC GGCGGCAGCC TTTCCCGGGC GCTGGAGATG GAGGAAGGGA GCGCCGGGAC AGCCCGGCAG GGACTGATCG AACGGCTTCG GACCCTCACC CTGGAAGAGA TCACCCCCCT CTTCGCGGCC GCCGAGGAAC TGGCCGCGGA CCGGGAACGC GCCGTGGAGG CCCTTGGCAC CCTCACCTCC CTGTTGCGTG ATGTTCTCCT CATCCAGGGG GGGAGTAACG AGGTGGTCAA CCGGGATCTC GTCGACCTTC TCGAAGAAGA AGCGTGCCGG ATGTCGCCGG AGCGGACCCT CACCCGCCTC GGCCACGTCA TGGAGGCGCG CCAGGCGCTC CAGCGCAATG CAAATCCCCG GCTCACCATG GACGTGCTCC TCATGCGCCT GGCGGACCGG ACGACACCGT AA
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Protein sequence | MPFSRVLGQE TAVNVLQRAL RSGKTAHAYL FEGIEGCGKM TTALAFIEAA FCRRDDGCGS CPSCRKMAGL QHPDLHRLAP EGAFIKIDQV RELQRELSLR PVEAPMKACI IDDADRLNPA AANALLKTLE EPPGNALLIL LTTNPAGILP TVRSRCQLLR FSPLPERVIE EYLTDAGREP AAARLAASLA GGSLSRALEM EEGSAGTARQ GLIERLRTLT LEEITPLFAA AEELAADRER AVEALGTLTS LLRDVLLIQG GSNEVVNRDL VDLLEEEACR MSPERTLTRL GHVMEARQAL QRNANPRLTM DVLLMRLADR TTP
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