| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2107 |
|---|
| Symbol | |
|---|
| ID | 2685975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2321225 |
|---|
| End bp | 2325037 |
|---|
| Gene Length | 3813 bp |
|---|
| Protein Length | 1270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637126798 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_953156 |
|---|
| Protein GI | 39997205 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA CTTTCGTTGC CGACATACAG AAATTCACCC TTGCAAATCG TGCTCTTCTT
GAGCGGGAGA CCGATGAGCA ACTTCAAGGT ATCTACGGCT GGTTGCCCGA CGGTTCCTTT
GCCGATGCAT CCCGTTATCC GGCTATTCAT CAGCTTGACG AGGCCCGAGA AACGCGCCTC
CAACTGGAAC ACTATGCAGA GGAAGAAAAA GCTGCCGGTT TTTCTTCTGT TGATTCCCGT
CGCAAGATCG TCCGCGAGAC TGCCTTCACC TGGCTAAACC GCCTCGTTGC CTTCCGCCTC
CTTGAAGAGC GCAAGCTCTT GAAGCAAATT GTTGCCAAAA TAGACAAGTC CAATGGATTC
ATCTTCTGGC TCACTGCTGA AGGAAATGAA GAGGTTTACA AGCTGCATCA GCAAGGCGAC
CTGCCGCTTA ACCCAATGGG TGAAGGCCCC AGCAACGTGG CGTATCGCCG ATTCATCCTC
TGGCAGTGCG GCGAGCTTGC CCGCGATGTG TCCGTGCTCT TTGACCCATC CACACTTCCT
ACCCGCCTCT TCCCCCGGCC AGCGATTGTC AAGCAACTCG CTGAATCCAT GAACACCGAA
GCCCGTATAG AAGCTTGGAA ACCGGGTAAT GAGGAAACCC TCGGGTGGGT TTATGAAGGC
TTTATTGAAG ATGAAAACGA GGCTGTCTTT AAGAAATTCA GCAAAGGGAA AAAGGTCATT
GCCGAGGAAA TCGGCGCGGC GACTCAGCGG TTCACCCCTC GCTGGATCGT TCGGTTTCTG
GTGGAAAACT CGCTGGGACG ATTATGGGCT GAGATGCATC CTGACAGTAG GCTCAAGGAT
TCGCTCTCTT ACCTCGTGCC AATAGAGAAC TCTCAAGCCC ATCCGCTGAA GCTGGTACGT
GATATTACAT TCCTTGACCC CTCATGCGGG TCAATGCATT TCGGTCTGGT AGCATTCGAC
CTCTTCGCTG AGATGTATCG TGAGGAATTT GAAAAGGCGG GACAGCCCGG CTGGCCGGAG
AACCCTTCCG TTAATGCTGA AGATGAAATT GCGAGCAGTA TCATTGCTCA TAATCTGCAT
GGGATTGATA TCGACCTTCG TTCCGTCCAG ATTTCCGCTC TTACACTCTT ATTGCGTGCG
CGAACTTTAA GCCCCAAATG TGCCTTTACT GACCGTAATC TTGCCTGTGC GAACGTCGAA
CAAACCAGCG GCGGCAAGCT TGAGACTCTC ATTGCTGCTG CTAAATTCAG TCACCCCATC
TATGAACGTG TTCTCCGGAC CCTTGCCGCT GAGATGAAGG ATTCGGACCA GCTTGGTAGT
CTCCTCCGTT TGGAGAGGAG TCTGGAGAGA CTGGTGATCG AAGAACGCCG TAAGGCGGAA
GAAAATAAGC AGTTTCTTCT CTCATTTCCC GGGATATCGC CAGAGCAATT TGATACCCAA
GCAGGCATTG AGGAGTTTTT TGATCTCCTC TCTGATCAGT TGCTGCGGCA TCTTGACTTT
TTTGTTCGTG CGTCACGAGA GATGGGAGGC GACCCTGGCC ATATTGTAAA CGAAGCTGCC
AAAGGATTGC GATACATGCA GTTGGTCTCT CACCATTATG ATGTTGTAGC GACCAATCCG
CCCTATATGA GCCGCCGGAA CATGTCCGAT GTCATCGCTA AGCATCTTGA TAAACATTAC
CCTGAAACGA AGGGTGACCT ATACGCCGCC TTCATTGCCC GATGTTTGGA ATTGGTTGCA
CCACAGGGAA AGGTGGCCAT GGTAACGCAG CAATCGTTCA TGTTCATCGG GACTTATGAG
AAATTCCGAA GCAACCTACT TTCTAGAGTG ACTGTTGAGA CGATGGCGCA TCTGGGGCCT
AAAGCCTTTC CCAATATTAC TGGAGAGAAA GTCAATACAA CTGCCTTCGT TATTCGGCGT
GAGCCGGATG GAAAGTCGCT GGAGGAGCAC TGTGGGGTGT ACTTCCGCCT AGTGCGCGAG
AGGGATGCTG TAGCCAAGCA AATAGCTTTT GAGGGTGCAG TCTCCGCTAT GCGTTCAGGC
ATGACCACTC CAATTGTCTT CACCTACCGC CAAATTGACT ACGACACCAT ACCAGAAAAG
CCCTGGGTTT ATTGGATGCC TGAAAAGATT CAGGAGCTTT TCCGCCAAGG TCGCCTCCTT
TCCGTTGTTG CCCCACCCAA GGTTGGTCTT CAGACAGGGG ATAATACGCG TTTCCTCCGC
AAATGGTGGG AAATTGGGGT GAATCATATT GCCAGAAATG CGACTTCATG CTCAGACACC
AAGCGTTCTG GAGTTAAATG GATTCCTTAT ATGAAAGGCG GAGCACCCAT CCCTTGGAAT
GGGAATCATG AACATGTTGT TAACTGGAAG ATGGATGGTG TTGAAATACG GGCCTTCTGT
CCCAGGGCAG TTGTTAGAAA CCCCACCTTC TATTTCCGAA AAGGCGTGAC GTGGAGCGAT
GTAAGCCCCA AAGGTTTTGC AGGGCGGTTA TCCCCAGGTG GGTTTATTCA TGATGTAAAA
GGCATGACGT GCTATCCGAG TGACGAATCG CTCAATGAAG TCCTTGGCAT TTTTAACTCG
ACCACAGCGA AGTTTATCCT GAGCGCCTTG AATCCCACCA TTTCCTTTCA AGTAGGTGAT
ATCGAACGCC TGCCAATCCC CAGCAAGTCT TCCAAGGACC TAGAAGCTAA AGTTGAAGAA
TCAGTATCAT TGGCTCAAAA GGACAGCTCC GACAGCGAAC GGACCTACGA CTTTATTCAC
CCGCCGCTTT GTGTAACGGA AGTAGACGAG AGACATGCCC GCTTGCGACG AATCGAGGAG
GAGATTGACC AGGAGGTCAC TCGCCTCTAC GGTCTGGATG AAGCGGACCG TCTTGCCCTC
AAAACCGAAC TGGAGGGAAT AAAGGCTGTA GCTGAAGATA ATAATGAAGA AGAAGGTGAT
ACAGAGGAAG AAGAGGAAAC CGTCGCAGGG GCGTGGACCG ACTTATCGCT TGCCCGCGCC
TGGGTGAGTT ATGCTTTCGG CATGGCCCTT GGCAGATACC GGATTGGCGA GCCCGAGGGC
TTGGGGCGAG GAAACTTTGA TGCTGCGACC ATTGCCGCCA TCAGCGCCCT CATCGACTCT
GACGGGATCA TGCCTTCGGA CGCCGGCCAT CCCCAGGACA TCGTGTCTCG GACTCTGCGA
ATTCTGGAAC TCATGCGTGG GGAGGATACT GCGCGGAGGC TCGTCCGTGC AGCCACCGGC
GGCGACGGCG TGCCGGAGAA CCTTCTGCGC GGCTTCCTGG ATCGCTTCAC TGGTCAGCCA
GAGGTTTCGT ACTGGCGCTA TCATTACCAG CTCTACCGCA AACGCCCCAT CTATTGGCCG
TTGCAGTCGC CAAAAAGAAA ATTCACCGTC TGGATTTTCC AGGAACGCTT CACCACCAAC
TCCCTCTTCG AAGTACGTAG AATGGTAGAG GAGCGCCTGC GCATGCTGGA GCGGGAGATC
GCCGACAAAC GAATCGTGGC AGCCAGCAAT CGCAGTGTGG CGAAAGAACT CGACAAGCTC
CTCGAGCTCT CCGACGATCT GCGAGATTTT TCGAAAAACC TTCAAGACAT CCTTCAGGCC
GGATACACCC CACATATCGA CGATGGGGTG CTCCTCAACG CAGCTCCACT GCATACTCTT
CTGCCGAGCT GGCCGGAGAC TCAGAAGGCT TGGCAGGAGC TTGCCGAAGG GAAATACGAT
TGGGCGCAAC AGGCCATGGA CCATTGGCCC GAACGGGTAC GGGAAAAGTG CAAGACGAAC
AAGTCATTCG CCATCGCCCA CGGGCTGGCG TAA
|
|---|
| Protein sequence | MNDTFVADIQ KFTLANRALL ERETDEQLQG IYGWLPDGSF ADASRYPAIH QLDEARETRL
QLEHYAEEEK AAGFSSVDSR RKIVRETAFT WLNRLVAFRL LEERKLLKQI VAKIDKSNGF
IFWLTAEGNE EVYKLHQQGD LPLNPMGEGP SNVAYRRFIL WQCGELARDV SVLFDPSTLP
TRLFPRPAIV KQLAESMNTE ARIEAWKPGN EETLGWVYEG FIEDENEAVF KKFSKGKKVI
AEEIGAATQR FTPRWIVRFL VENSLGRLWA EMHPDSRLKD SLSYLVPIEN SQAHPLKLVR
DITFLDPSCG SMHFGLVAFD LFAEMYREEF EKAGQPGWPE NPSVNAEDEI ASSIIAHNLH
GIDIDLRSVQ ISALTLLLRA RTLSPKCAFT DRNLACANVE QTSGGKLETL IAAAKFSHPI
YERVLRTLAA EMKDSDQLGS LLRLERSLER LVIEERRKAE ENKQFLLSFP GISPEQFDTQ
AGIEEFFDLL SDQLLRHLDF FVRASREMGG DPGHIVNEAA KGLRYMQLVS HHYDVVATNP
PYMSRRNMSD VIAKHLDKHY PETKGDLYAA FIARCLELVA PQGKVAMVTQ QSFMFIGTYE
KFRSNLLSRV TVETMAHLGP KAFPNITGEK VNTTAFVIRR EPDGKSLEEH CGVYFRLVRE
RDAVAKQIAF EGAVSAMRSG MTTPIVFTYR QIDYDTIPEK PWVYWMPEKI QELFRQGRLL
SVVAPPKVGL QTGDNTRFLR KWWEIGVNHI ARNATSCSDT KRSGVKWIPY MKGGAPIPWN
GNHEHVVNWK MDGVEIRAFC PRAVVRNPTF YFRKGVTWSD VSPKGFAGRL SPGGFIHDVK
GMTCYPSDES LNEVLGIFNS TTAKFILSAL NPTISFQVGD IERLPIPSKS SKDLEAKVEE
SVSLAQKDSS DSERTYDFIH PPLCVTEVDE RHARLRRIEE EIDQEVTRLY GLDEADRLAL
KTELEGIKAV AEDNNEEEGD TEEEEETVAG AWTDLSLARA WVSYAFGMAL GRYRIGEPEG
LGRGNFDAAT IAAISALIDS DGIMPSDAGH PQDIVSRTLR ILELMRGEDT ARRLVRAATG
GDGVPENLLR GFLDRFTGQP EVSYWRYHYQ LYRKRPIYWP LQSPKRKFTV WIFQERFTTN
SLFEVRRMVE ERLRMLEREI ADKRIVAASN RSVAKELDKL LELSDDLRDF SKNLQDILQA
GYTPHIDDGV LLNAAPLHTL LPSWPETQKA WQELAEGKYD WAQQAMDHWP ERVREKCKTN
KSFAIAHGLA
|
|---|
| |