| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2085 |
|---|
| Symbol | |
|---|
| ID | 2687883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2290675 |
|---|
| End bp | 2292147 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637126776 |
|---|
| Product | ADP-heptose synthase |
|---|
| Protein accession | NP_953134 |
|---|
| Protein GI | 39997183 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGCA AGAACGTCGA ATCTCTTTTT GCCCATGCCG GGGCGATCAA CGCCCTGGTG
ATCGGCGACC TGATGCTCGA CCAGTACCTG TGGGGCAAGG CCGAGCGGAT TTCCCCGGAG
GCGCCGGTTC AGGTGGTGGA CGTGACCCGG GAGGAGATCC GGATCGGCGG CGCCGGCAAC
GTGGCCAACA ACCTGGTGGC CCTCGGCTGC CGGGTGAGCG TGGCGAGCGT GGTGGGGGGG
GACGAGAACG GCACCATTCT CCTCCATGCC TTTTCCGGCA AGGGGATCGA CGTGACCGGC
ATCGTGGAGG ACCCGTCGCG CACTACCAGC CGAAAGACCC GCGTCCTCGC CTCAAACCAG
CAGATCGTCC GGATTGACCG GGAATCCCGG GACGAGATCG GCCCGGACAA CGAGCGGCGC
ATCGTCGACT ACCTGAACGC CCACGGCGAC CGCTTCAACG TGATCCTCGT GTCGGACTAT
CTGAAGGGGG TCCTGACCCC GACGCTCCTG GCCGAGGTGA TCGCTTTTGC CCGCAAGCGC
GAAATCCCCG TCGTGGTTGA TCCAAAGGGG AGCGACTACG CGAAATACCG GGGTGCCACG
GTTTTGACCC CCAACCGGAA GGAGGCGGAA GCGGCCTCCG GCATCGCCAT CCGCGACGAT
GAGAGCCTCT GCCGGGCCGG CGAGCGGCTG CTGGAGACGG CCGATCTGAC CGCTCTGGTC
ATCACCCGGA GCGAGGAGGG GATGTCGCTC TTCCTGCGGG GCGGCCAGGT GGTGCATATT
CCCACCTATG CCCGCGAGGT ATTCGACGTG ACCGGCGCCG GCGATACCGT GCTGGCCGTG
CTCGGCATGG CCCTGGCCGG CGGGGTCGGT TTCGCCGACG GGGCCCGGCT GGCCAATGTG
GCGGCCGGCG TGGCGGTGGG GAAGGTGGGC ACGTCCACGG TATCTCCTGC CGAGATTGTC
GGATCGCTGG GATTCCAGCA CGGCGAGGGG GACGCCAAGG TCAAGAACCT GGATGTCCTC
GCCGGCATCA TCGCGGCGGA AAAGGCGCAG GGCAAGCGGG TGGTGTTCAC CAACGGCTGT
TTCGACCTTC TGCACGTGGG GCACGTCAAA TATCTCCAGA AGGCCCGCAG CTTCGGCGAC
CTGCTGGTCC TGGGTCTCAA CAGCGATGCC TCCATCCGGC GGCTCAAGGG TGAAAAGCGC
CCGCTCATCG GCCAGGAGGA ACGGGCCCAC ATCCTTGCTG CCCTGGATTG CATCGATTAC
GTGGTCGTTT TCGATGAAGA CACTCCGCTC AACCTGATCG AGACCCTCAG ACCGGCGGTG
CTGGTCAAGG GAGGCGACTA CACCCTCGAC GGGGTAGTGG GGCGCGAGGT GGTCGAATCC
TACGGAGGGC GGGTGGAACT GGTGGCCTTC GTGGACGGTC GCTCCACGAC GAACATCATC
GAGAAGATTC TGAAGGCCTA CGGCGAGGAG TGA
|
|---|
| Protein sequence | MERKNVESLF AHAGAINALV IGDLMLDQYL WGKAERISPE APVQVVDVTR EEIRIGGAGN
VANNLVALGC RVSVASVVGG DENGTILLHA FSGKGIDVTG IVEDPSRTTS RKTRVLASNQ
QIVRIDRESR DEIGPDNERR IVDYLNAHGD RFNVILVSDY LKGVLTPTLL AEVIAFARKR
EIPVVVDPKG SDYAKYRGAT VLTPNRKEAE AASGIAIRDD ESLCRAGERL LETADLTALV
ITRSEEGMSL FLRGGQVVHI PTYAREVFDV TGAGDTVLAV LGMALAGGVG FADGARLANV
AAGVAVGKVG TSTVSPAEIV GSLGFQHGEG DAKVKNLDVL AGIIAAEKAQ GKRVVFTNGC
FDLLHVGHVK YLQKARSFGD LLVLGLNSDA SIRRLKGEKR PLIGQEERAH ILAALDCIDY
VVVFDEDTPL NLIETLRPAV LVKGGDYTLD GVVGREVVES YGGRVELVAF VDGRSTTNII
EKILKAYGEE
|
|---|
| |