Gene GSU2078 details

Gene Information

• Locus tag: GSU2078
• Symbol: rodA
• ID: 2687907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 2284208
• End bp: 2285308
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637126769
• Product: rod shape-determining protein RodA
• Protein accession: NP_953127
• Protein GI: 39997176
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0772] Bacterial cell division membrane protein
• TIGRFAM ID: [TIGR02210] rod shape-determining protein RodA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.73314
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGACC GACGACTCAT CACCAACTTC GACTGGATGC TGCTGGGACT CGTGCTGCTT 
ATCTGTGCGG TAGGAGTTGT GAATATCTAC AGCGCCTCAT CGTCGTACGT TCTGTCGGGC 
ACACCTTACT ATCTCAAGCA GATGTCCTGG GTTTTGGTCG GCCTCGCCAT CATGCTGCTG 
GTCTGCAGCA TCGACTACCA CCTGCTGGAG GATGTTGCCT ACTGGTTCTA CGGCATCCTG 
TTCCTTCTCC TGCTCGTGGT GCTGGCTTTC GGCAAGACTT CAATGGGAGC CACCCGATGG 
CTTCACCTGG GATTTATCAG TGTTCAGCCA TCTGAACCCA TGAAAATCAT AGGGATCATC 
ACCATGGCCC GCATCCTGGC CAATATTCCG GTGTCAGGCG GCCTGGGGCT GCGGGAGCTG 
GCCTTCCCCG CCCTCATGAT CGGTGCGCCC GCCATTCTCA TCATGAAGCA GCCCGATCTC 
GGCACGGCGA TACTTGTCAT CCTCATTGCC GGATCCATGC TCGCGTTTGT CGGCATCCGT 
CTTTCCGCGC TGGCTGCCGT ATGCATTGCC ACCGTACCGG CCGTCTGGCT TGGCTGGCAT 
TACTATCTCA GGGATTATCA GAAAAACAGG GTTCTCAATT TTCTGGATCC TGAGAGGGAC 
CCGCTCGGCA CGGGGTACCA CATCATCCAG AGCAAGATTG CCGTGGGATC GGGCGGCCTG 
TTCGGCAAGG GATTTCTCCA GGGGACCCAG AGCCAGCTCC GCTTCCTGCC GGAACAGCAC 
ACGGACTTCG CATTTTCCGT TTTTGCCGAG GAATGGGGAT TTGTGGGGAG TCTTGTTGTT 
CTGCTGCTTT ACGCGGTGCT CACCCTGTGG GGGCTCCAGA TTGCACGGCG CTGCAACGAC 
CGTTTCGGAA GCCTCGTGGC TGTGGGCGTC ACGGCAATGC TTTTCTGGCA CATCATCATC 
AACATCGGTA TGGTAATCGG ACTCTTCCCC GTGGTCGGGG TGCCATTGCC TCTGTTTTCC 
TACGGCGGCA CATCCATGAT CACGTCAATG ACGGGCATTG GCATTCTCCT TAACATCAGC 
ATGCGACGCT TCATGTTCTA G 

 

Protein sequence

MIDRRLITNF DWMLLGLVLL ICAVGVVNIY SASSSYVLSG TPYYLKQMSW VLVGLAIMLL 
VCSIDYHLLE DVAYWFYGIL FLLLLVVLAF GKTSMGATRW LHLGFISVQP SEPMKIIGII 
TMARILANIP VSGGLGLREL AFPALMIGAP AILIMKQPDL GTAILVILIA GSMLAFVGIR 
LSALAAVCIA TVPAVWLGWH YYLRDYQKNR VLNFLDPERD PLGTGYHIIQ SKIAVGSGGL 
FGKGFLQGTQ SQLRFLPEQH TDFAFSVFAE EWGFVGSLVV LLLYAVLTLW GLQIARRCND 
RFGSLVAVGV TAMLFWHIII NIGMVIGLFP VVGVPLPLFS YGGTSMITSM TGIGILLNIS 
MRRFMF