Gene GSU2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2050 
SymbolsecA 
ID2686041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2249292 
End bp2251985 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content61% 
IMG OID637126741 
Productpreprotein translocase subunit SecA 
Protein accessionNP_953099 
Protein GI39997148 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0121176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGAG CCATCATAAA GAAGATCGTC GGCAGCAAGA ACGAGCGTGA ACTCAAGCGC 
ATGTGGCCGG TGGTGGAGAA GATCAACGGC CTTGAGTCAC AGGTGGCGGG CCTGACCGAC
GATCAGCTCA GGGAGAAGAC GTTCGAGTTC AAGGAGCGGA TTGCCCGGGG CGAAAGTCTT
GAGTCCCTGC TGCCCGAGGC CTTCGCCGTG TGCCGGGAAG GGGGCAAGCG GGCTCTCGGC
ATGCGTCACT TCGACGTGCA GCTTATCGGC GGCATGGTGC TCCACCAGGG GAAGATCGCC
GAGATGAAGA CCGGCGAGGG GAAGACACTG GTGGCGACCT TGCCGGCATA CCTGAACGCC
CTCACCGGCC GCGGGGTACA CGTGGTCACG GTCAACGACT ATCTGGCCCG GCGGGACTCC
GAGTGGATGG GGCGTCTCTA CCGCTTCCTG GGACTCACCG TGGGGGTCAT CGTCCACGGC
ATCGATGATG ACGAACGTCG CGCAGCTTAC GCCGCGGACA TCACCTACGG CACCAACAAC
GAGTTCGGCT TCGATTACCT GCGGGACAAC ATGAAGTTCG CCCTGGAGGA TTACGTTCAA
CGCCCCTTCT TCTTCTCGAT CGTGGACGAG GTGGACTCCA TCCTCATCGA CGAGGCCCGG
ACGCCCCTCA TTATCTCCGG TCCCACCGAG GACTCCACCG ACAAGTACTA CATCATCGAC
CGGATCATCC CCCACCTGAA AAAGGGGGAG GTCAAAGAGG TGGAGGCGAA CACCCTGTCG
GGCAAGCGCA AGGTCTACAC CGGCGACTTC ACTGTCGACG AGAAGGCCCG CTCTTCCTCT
CTCACCGAAG AAGGGGTCGC CAAGGTCGAG AAGCTGCTCA AGATCGACAA CCTCTACGAC
CCCCGCCACA TGGAGATCCT CCACCATGTG AACCAGGCGC TCCGGGCCCA TGCCCTGTTC
CGGCGCGACG TGGACTATGT GGTCAAGGAC GGCGAGGTCA TCATCGTCGA CGAGTTCACC
GGCCGCCTCA TGCCGGGCCG CCGCTGGTCC GACGGACTCC ACCAGGCCAT CGAGGCCAAG
GAAGGGGTGG AGATCGAGAA CGAGAACCAG ACGCTCGCCA CCATCACCTT CCAGAACTAT
TTCCGCATGT ACGAAAAGCT CTCCGGCATG ACCGGCACCG CCGACACGGA AGCCGAGGAG
TTTCACAAGA TCTACAAGCT GGAAGTGACG GTCATCCCCA CTAACCGTCC CCTGCTGCGC
CCGGACTTCC CGGACGTCAT CTACAAGACC GAGCGGGAGA AGTTCAACGC CGTCATTGAG
GAAATCAAGG GGTGCCACGA GAAGGGGCAG CCCACCCTGG TGGGAACCAT CTCCATCGAG
AAATCCGAGG TACTGGCGGA GATCCTCAGG AAACAGGGGA TTCCCCACAA CGTGCTCAAC
GCCAAGCAGC ACGAGCGGGA GGCCGAGATC GTGGCCCAGG CCGGCCGCAA GGGAATGGTG
ACCATCGCCA CCAACATGGC GGGCCGCGGT ACCGACATTC TGCTGGGCGG TAACCCCGAA
GGTCTCGCCA AACAGTGGCG TCGGGCCAAT CCCGATGCCC CAGAGGAAGA GTACGAAAAG
GTGCTGGCCG AGTACCGCAC CCTCTGCGCC AGGGAGCACG ACGAAGTGGT GGCCCTGGGC
GGTCTCCACA TCATCGGCAC CGAGCGCCAC GAGTCCCGGC GGATCGATAA CCAGCTCCGG
GGCCGGTCGG GACGCCAGGG GGATCCGGGC TCATCCCGCT TCTATCTTTC TCTCGAGGAC
GACCTCCTGC GGATCTTCGG CTCAGAGCGG GTTTCCAAGA TAATGGACTT CCTCAAGATC
GAAGAGGGAG AGGCCATCAC CCACGGCATG ATCACCAAGG CCATCGAGAA TGCCCAGAAG
AAGGTGGAGG CCCACAACTT CGAGATTCGG AAGCACCTGA TCGAGTACGA CGATGTCATG
AACAAGCAGC GCGAGGTGAT CTATACCCAG CGTCGCGAGA TCCTGGCCGG CCAGGACATC
CGTCGTCACT TCACCCAGAT GATGGACGAT ACCATTGAGG AAATCTCCTC CTTTGCCATA
GAAAAGGTGT CGGCCCATGA ATGGGACTGG CAGTCGATCG GCGAAGGGAT TCTGAAGACC
TACGGCTTCC AGATCGACAT ACCGCCCCAG ACCATGGACC GGCTCTCCCC CGAGAGTTTC
CGCACCCTGC TCAAGGAGAA GGTCCACGAG GCCTTTGATG CCAAGGTGGC GGCCTTTGGC
GACGAACTGA TGGACCACCT CATCAAGGTG ATCATGCTCC AGACCATCGA TGCCCAGTGG
AAGGATCATC TCCTCTCCAT CGACCACCTC AAGGAGGGGA TCGGGCTGCG GGGCTACGGC
CAGAAGGATC CGAAGCAGGA GTACAAGAAG GAAGCCTACC AGCTGTTCAT GGACATGATG
GCCCGCATCG CCGCCGAGAC CGTGGAAAAG ATATTCTGGG TCCAGATTGC CCACGAGGAA
GATGTCGAAC GGATGGAAGA GGAGCAGCAG AAGCAGGCCC GGAAAAAAAT GGTTTTCAAC
CTGGTCGACG AGGATGAAAC CTCGGAGCCG TCCAAGTCCA AGAAGCTTGC CGGGCGCAAC
GAGCCCTGCC CCTGCGGTAG CGGCAAGAAG TACAAGAAGT GCTGCGGAAA ATGA
 
Protein sequence
MFGAIIKKIV GSKNERELKR MWPVVEKING LESQVAGLTD DQLREKTFEF KERIARGESL 
ESLLPEAFAV CREGGKRALG MRHFDVQLIG GMVLHQGKIA EMKTGEGKTL VATLPAYLNA
LTGRGVHVVT VNDYLARRDS EWMGRLYRFL GLTVGVIVHG IDDDERRAAY AADITYGTNN
EFGFDYLRDN MKFALEDYVQ RPFFFSIVDE VDSILIDEAR TPLIISGPTE DSTDKYYIID
RIIPHLKKGE VKEVEANTLS GKRKVYTGDF TVDEKARSSS LTEEGVAKVE KLLKIDNLYD
PRHMEILHHV NQALRAHALF RRDVDYVVKD GEVIIVDEFT GRLMPGRRWS DGLHQAIEAK
EGVEIENENQ TLATITFQNY FRMYEKLSGM TGTADTEAEE FHKIYKLEVT VIPTNRPLLR
PDFPDVIYKT EREKFNAVIE EIKGCHEKGQ PTLVGTISIE KSEVLAEILR KQGIPHNVLN
AKQHEREAEI VAQAGRKGMV TIATNMAGRG TDILLGGNPE GLAKQWRRAN PDAPEEEYEK
VLAEYRTLCA REHDEVVALG GLHIIGTERH ESRRIDNQLR GRSGRQGDPG SSRFYLSLED
DLLRIFGSER VSKIMDFLKI EEGEAITHGM ITKAIENAQK KVEAHNFEIR KHLIEYDDVM
NKQREVIYTQ RREILAGQDI RRHFTQMMDD TIEEISSFAI EKVSAHEWDW QSIGEGILKT
YGFQIDIPPQ TMDRLSPESF RTLLKEKVHE AFDAKVAAFG DELMDHLIKV IMLQTIDAQW
KDHLLSIDHL KEGIGLRGYG QKDPKQEYKK EAYQLFMDMM ARIAAETVEK IFWVQIAHEE
DVERMEEEQQ KQARKKMVFN LVDEDETSEP SKSKKLAGRN EPCPCGSGKK YKKCCGK