Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2047 |
Symbol | |
ID | 2687973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2246279 |
End bp | 2247466 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637126738 |
Product | hypothetical protein |
Protein accession | NP_953096 |
Protein GI | 39997145 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0829987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTCCC GAAAGATACT TGTCATAGCC CTGATACTTT TCGGTTCGCT GACGGTTTTT GCCGGTGATT CACCGTATGC ACCGCCGGCG GGCGGAGAAG CCATCGGGCG GTTGATGGAA AGGGCCATGC ATGACGGTCT GGTAGCGGGC GGGATCGTGC TCGTGGGGAA CCGTCACGGC ACGATCTACG AGCACGTCTT CGGCAAGCAG TCGTCCCTGC CCGATTCCCC ACCGGTAACA TCTTCCACTA TTTTCGACAT CGCTTCCCTC ACCAAGGTCA TCGCAACGAC CCCTGCAGTC ATGAGGCTGG CGGAGGAGGG TCGACTCTCC TTGGTCGATC CCCTGGTACG CTGGTTCCCC GAATTTGCAG GACACGGCAA GGACGATGTC CTTGTGGTGC ACCTGTTGAC CCACACCTCC GGTCTCGACG ATTTCTCCCT GTCATCTGCC GATCCCCTGC AAAGCGCCAT CAGCGGGGTG GCCGCCCAGA AGTTGAAAGG CGAGCCGGGC AACCGGTTCA GGTATGCCGA TATCAACTTC ATCCTGCTGG GCGAGCTGGT CCGGCGCGTT ACCGGCAGTA CTCTTGACCG CTATGCGGCG GATGCCTTTC TCCGCCCCTT GGGCATGAAG GACACCGCAT TCCTGCCCGG CCCCGCAATT GCTGAGCGGT GCGCCGCCAC CCTGGACGGC TCGGGGGGCC CCCACTTCGG CACGGTGCAA GACCCCCTGG CGCGTCTCCT GGGAGGCGTT GCCGGACATG CGGGCCTCTT TGGTACGGCG AGCGATTTGG CACTCTTCTG CCGGATGATC CTCGGCGAAG GTGAGCTCAA CGGCCGGCGC GTTCTGGAGG AGCGAACGGT GCGCCAGATG ACGGCCCCCT ATTTTTCCCG CGGGGGCAAG GTGACGCGGG GGCTCGGCTG GGACATGGCA TCCCCGTTTT CATCGCCCCG GGGAGAGGGA TTTTCCGAGG AATCGTTCGG CCACACCGGC TACTCGGGCG GATCGATCTG GATCGATCCG CGGACGGATA CTTACGTGAT CTTTCTCTCG GTCCGCCTTG ATCATCGCCA TACGAAGGCC TTCAGCCAGC TGCGGAGCGA TCTGTCGACA CTGGCCTTCC GGATGCTCTT TCCGGACCTT CGGGAGCTGG TGGAAACGGC ATCCTACGGC CCTGTTACGA GCCGGTAA
|
Protein sequence | MLSRKILVIA LILFGSLTVF AGDSPYAPPA GGEAIGRLME RAMHDGLVAG GIVLVGNRHG TIYEHVFGKQ SSLPDSPPVT SSTIFDIASL TKVIATTPAV MRLAEEGRLS LVDPLVRWFP EFAGHGKDDV LVVHLLTHTS GLDDFSLSSA DPLQSAISGV AAQKLKGEPG NRFRYADINF ILLGELVRRV TGSTLDRYAA DAFLRPLGMK DTAFLPGPAI AERCAATLDG SGGPHFGTVQ DPLARLLGGV AGHAGLFGTA SDLALFCRMI LGEGELNGRR VLEERTVRQM TAPYFSRGGK VTRGLGWDMA SPFSSPRGEG FSEESFGHTG YSGGSIWIDP RTDTYVIFLS VRLDHRHTKA FSQLRSDLST LAFRMLFPDL RELVETASYG PVTSR
|
| |