| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2043 |
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| Symbol | pilD |
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| ID | 2687991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2238751 |
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| End bp | 2239530 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637126734 |
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| Product | type 4 prepilin-like proteins leader peptide processing enzyme |
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| Protein accession | NP_953092 |
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| Protein GI | 39997141 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTAC CGATAGTGTT CTATCTTTTT TCCTTTGTCC TCGGGGCAGT GGTCGGCTCA
TTCCTGAACG TCTGCATTTA TAGGCTGCCA ACGGGTGAGT CGGTCGTGTT TCCTCCTTCC
CGCTGCACCT CCTGCGGGAC GCGGATTCGT CCCTGGGACA ACATCCCTAT TCTGAGCTGG
CTCATCCTGC GCGGAGCATG CCGCGCCTGC AGGGCAAAGA TCTCGGCTCG CTATCCCCTG
GTTGAACTTA TCAACGGCTT GCTCTGCCTC GCCCTGTTCC TCAAGTTCGG GCCGACCCTG
ACCTTTGCGG CCCTCTTCGT ATTCTGCTCC GCCCTGGTGG CGATCTCCTT CATTGACCTC
GACCATCAGA TCATCCCCGA TGTCATCAGC CTCCCGGGAA TCGTTCTTGG ATTTGTCCTG
TCGTTCTTTC TGCCCTGGCT CGGCTGGCTC AATTCCCTCA TCGGCATCGC GGCGGGGGGA
GGGAGCCTCC TGCTGGTTGC CTGGCTCTAC GAGCGGCTGA CGGGCAAGGA GGGAATGGGC
GGAGGTGACA TCAAGCTTCT TGCCATGATG GGGGCCTTTC TCGGCTGGCG GGCGGTGCCG
TTCATCATCT TTGCCAGCTC TCTGGTGGGC TCGGTCATCG GGCTCACACT CATGATGCTC
CAGAAAAAAG ATAGCAAGCT TGCCATCCCG TTCGGCCCGT TCCTGGCGCT GGGGGCACTT
CTCTACATCT TTTTCGGCAA GGCGATCATT CTCTGGTACC TGAGCATCGG CGCCCGGTAG
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| Protein sequence | MTLPIVFYLF SFVLGAVVGS FLNVCIYRLP TGESVVFPPS RCTSCGTRIR PWDNIPILSW
LILRGACRAC RAKISARYPL VELINGLLCL ALFLKFGPTL TFAALFVFCS ALVAISFIDL
DHQIIPDVIS LPGIVLGFVL SFFLPWLGWL NSLIGIAAGG GSLLLVAWLY ERLTGKEGMG
GGDIKLLAMM GAFLGWRAVP FIIFASSLVG SVIGLTLMML QKKDSKLAIP FGPFLALGAL
LYIFFGKAII LWYLSIGAR
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