Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2030 |
Symbol | |
ID | 2686076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2223192 |
End bp | 2223788 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637126721 |
Product | type IV pilus biogenesis protein PilO |
Protein accession | NP_953079 |
Protein GI | 39997128 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3167] Tfp pilus assembly protein PilO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.72092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCGA GAATAGAAAA ACTGCTCAAG CTCCCCAATA AACAGAAGCT AGCTCTCCTT GCGGCGATTC TTGTGGTTGA AGGGGCAGCC CTGTATTGGG GCCTGTATGC CCCCCGCCAG AAGGAGCTTA CGGCACTGCG CGGAAAGCTT GAAAAACTCC AGACCGAGGT CCAGGAAAAG ACCCGGATCG CCAACAACCT GCCCAAGCTG AAAAAGGAGT ATCAGCAACT GCAGAAGGAT CTGGAGAACG CCCTAACCGA GTTGCCCAAC CAGAAGGAGA TCCCCTCGCT GCTCACGGGG ATTACCAGCG TAGGCAAAGG AGCCGGTCTC GATTTTCTCC TCTTCAGGCC CAAGGGTGAA GTGCCCAAGG ACTTCTATGC CGAAGTGCCG GTCGATATCT CTGTATCGGG ATCGTTCTAC GGAGTGGCGA ATTTCTTTAC CGCCGTCGGT AACCTGCCGA GGATCGTCAA CATTACAAAC GTATCGTTCA CTGACATCAA GCCCGTGGGT GGCAAGACCA CTGTCAAGGT CAACTGTCTG GCCACGACCT TCCGCTTCAT CGAAAAGAAA GAGACCAAGG ATGACAAGAA GAAATAG
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Protein sequence | MDARIEKLLK LPNKQKLALL AAILVVEGAA LYWGLYAPRQ KELTALRGKL EKLQTEVQEK TRIANNLPKL KKEYQQLQKD LENALTELPN QKEIPSLLTG ITSVGKGAGL DFLLFRPKGE VPKDFYAEVP VDISVSGSFY GVANFFTAVG NLPRIVNITN VSFTDIKPVG GKTTVKVNCL ATTFRFIEKK ETKDDKKK
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