| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2016 |
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| Symbol | |
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| ID | 2688049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2208461 |
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| End bp | 2210860 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637126707 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | NP_953065 |
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| Protein GI | 39997114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.334987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGA CTTCATTGAC CGGTTCACGT TGGCTCGATT CGGTGGCCCG GCGACTCAAG
CATCTGCGCG AAGGTCTCAA GTCTCCGGAA TCCGGGCGCT TGGAAGAGTT CAAGGCTCGC
ACCTTTCTCG TGGTCAAGTG TCGTTGGCTG CTCCTGACGC TTGTGGGCAT CTACTGCCTT
GTTGCGGGAA GTACGTATTA TGTCAGTCGT ATCGGTCTCT TTTTGTCACC CTCACAGGTG
ATGTTCCTCG TGGTTACCGC GTCGACGGTG ATTGCCTACA ATCTTCTGCT TCATCTCTTT
TACCAACGAA TTATCTGTTG TTTCAGATTC ATTAACGTCT TTCAGATTGT CCTCGACCTG
CTTCTGGTGA CGGTTCTCGT TCACCTCAGC GGTGGTGCCT CCAGTTGGTT CTGGCCGGTC
TATCTCATTG TCACCATTGA AGCCGCATTT CTGATTGAGG GGAAGCGTGA AGTCTGGTTC
GTGGGGGCGT TCGGCGGCAT TCTCTACGGG GCATTGCTTG CCCTTGAGCA TTTCGGCTTC
ATTCCAAACG TCCCCATGCC CTTTGTCGAG CCGGGGCTCC ACCAGGATCC TCATTACATT
CTTCTGGTCT GGCTCTGGGT GTCGCTGCTC AACGCGGCGG CAGCCGTCAT AGGTTCCTAT
TTTGTATCGG TGATCGAGCG TGAGTCGGAA GCGACGAGGC AAAGCGAAGA GCGGCTCATG
GGCTTCCTCG ATACGGCCAA CGATCTGATC CTGAGTTTTT CTCCCGAGGG CCGGCTTCGA
TACGTGAACG AGGCGTGGCA GCAGGTTCTC GGCTATACGG CAGAGGAGGC GAAGGAGCTT
TCCTTCTTCG GCATCATTCA TCCCGACAGC AGGGAGCGAT GCAATGCGGA ACTGGAGCGG
ATTCTCGCAG GCGATGTGCT CAGTCCGCTC GAAGCAACAC TGGTTGCCAA GGGAGGACGA
TCCATCATTG TTGAGGGGAG CCTCACCTGT GGCGTCGATG GTGAAGGCTC CACCGCAGTG
TGGGGCATCT GCCGGGACAT CACCGAGCGC AAGCAGGTGG AGGAACAGCT CTATCGTCTC
GCCCATCATG ACACACTGAC TGGGCTTCCC AACCGCATCC TCTTCCTGGA CCGCCTTCAG
CAGGCAAAGG CCCATGCCAA TCGATACCGG CATCATGTGG CGCTCATGTT TCTCGATCTG
GACCGCTTCA AGATCATCAA CGACACTCTC GGCCATCCAG TGGGCGACAA ACTCCTGCAG
GAAGTGGCGA AGCGCCTTGT GGACTGCGTG CGGGAGGTGG ATACCGTGGC GCGCATCGGT
GGCGACGAGT TCACCGTCGT GCTTGTGAAC ATCGATTCTG TCGAGGACGT GAAGCGGGTA
GCCCAGAAGA TACTCAAATC CCTGTCCGTT CCGTTTATGG TGGACAGCTT CGAGCTCTAC
ATCACCACGA GCATCGGCAT CGCCCTCTAC CCCGGCGACG ATGAAAATCC GGATAACCTG
GTCAAGAAGG CCGACATCGC CATGTACCAT GCAAAGGGGG AAGGGAGAAA CACCTTCAAG
TTCTACGTCC CCAAGATGGA CGCCAACGCG GACAAGCGGC TGCTCCTTGA AACCAGTCTG
CGCAAGGCGC TGGATAACGA AGAGTTCCGG GTTTACTATC AGCCCAAAGT CGATATCACG
ACCAAGCAGA TAACCGCCAT GGAGGCCCTG CTGCGCTGGC AGCATCCGAC GCTCGGCCTT
GTGGCTCCGT CGGAATTCAT TCCTCTGGCC GAGGAGACGG GGCTCATCGT TCCCATCGGC
GAATGGGTGC TGCGTGCCGC TTGTCTCCAG AATCGGAAGT GGCTCGAGAT GGGGCTGCCG
CCCATGAAGG TGGCAGTCAA TCTGTCCGGT TATCAGTTCC AGCAGCCTAA CCTGTTGGAT
ATCATACGCA CCGTGCTGGC TGATACCGGC CTTGACCCCG GACTTCTGGA ACTGGAGATA
ACCGAGAGCG TCATCATGCA GAACCCGGAT TTTGCCGTGG CGGTCCTGGC GGAAATCAGA
GACCTGGGCA TCCACATATC CATCGACGAC TTCGGCACCG GTTACTCGTC TCTGGCCCAC
CTGAAGCGCT TCTCCATCAA TACCCTGAAG ATCGACAAAT CGTTCGTGCG CGATGTGGAG
ATCAATTCAG CCGACGCCGC CATCGCCACG GCGATCATTG CCATGGGGAA CAGTCTCAAC
CTTAAGGTAA TTGCCGAGGG AGTGGAAACC GAGGGACAGT TGACGTTTCT GTCCGAAAAC
AAGTGCGATG AGGTTCAGGG GTTTTTGTTC AGTACGCCCA TGCCTTCGGA GGATGTGGCC
GATTTTCTTC GGGGCAGGAC CACCTTGGTG GCGCCTGTCA GTCTGAACTC AGCCCCGTAA
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| Protein sequence | MAQTSLTGSR WLDSVARRLK HLREGLKSPE SGRLEEFKAR TFLVVKCRWL LLTLVGIYCL
VAGSTYYVSR IGLFLSPSQV MFLVVTASTV IAYNLLLHLF YQRIICCFRF INVFQIVLDL
LLVTVLVHLS GGASSWFWPV YLIVTIEAAF LIEGKREVWF VGAFGGILYG ALLALEHFGF
IPNVPMPFVE PGLHQDPHYI LLVWLWVSLL NAAAAVIGSY FVSVIERESE ATRQSEERLM
GFLDTANDLI LSFSPEGRLR YVNEAWQQVL GYTAEEAKEL SFFGIIHPDS RERCNAELER
ILAGDVLSPL EATLVAKGGR SIIVEGSLTC GVDGEGSTAV WGICRDITER KQVEEQLYRL
AHHDTLTGLP NRILFLDRLQ QAKAHANRYR HHVALMFLDL DRFKIINDTL GHPVGDKLLQ
EVAKRLVDCV REVDTVARIG GDEFTVVLVN IDSVEDVKRV AQKILKSLSV PFMVDSFELY
ITTSIGIALY PGDDENPDNL VKKADIAMYH AKGEGRNTFK FYVPKMDANA DKRLLLETSL
RKALDNEEFR VYYQPKVDIT TKQITAMEAL LRWQHPTLGL VAPSEFIPLA EETGLIVPIG
EWVLRAACLQ NRKWLEMGLP PMKVAVNLSG YQFQQPNLLD IIRTVLADTG LDPGLLELEI
TESVIMQNPD FAVAVLAEIR DLGIHISIDD FGTGYSSLAH LKRFSINTLK IDKSFVRDVE
INSADAAIAT AIIAMGNSLN LKVIAEGVET EGQLTFLSEN KCDEVQGFLF STPMPSEDVA
DFLRGRTTLV APVSLNSAP
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