Gene GSU2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2006 
Symbol 
ID2688083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2199786 
End bp2200652 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID637126697 
Productbranched-chain amino acid ABC transporter, permease protein 
Protein accessionNP_953055 
Protein GI39997104 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.766894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTT TCCTCCAATC GCTCATCAGC GGCATTCTGA TCGGCGGCGT CTACGCCCTG 
ATCGGCATAG GACTCACCAT CATCTTCGGT GTCATGCGGG TCATCAACTT CGCCCACGGC
GACATCATGA TGATCGGCAT GTACCTGACC TATAACTTCT TCTCCCTGGC GGGGGTCGAT
CCGTTCGTCT CCATCGCCCT CACCATCCCG CTCATGTTCC TCTTCGGAGC CATTCTCCAG
AAAACATTCA TCAACCGCGT GCTCGGAGCC CTGCCCCAGA ACCAAATACT GCTTACCATC
GGCCTGGGAC TGATTATGAG CAACACGATG ATGTTCATCT ATACCTCCGA CTACAAGATC
CTGACTACAT CTTATTCGTC GAGCAGCTTC AATATCGGCA CCATCTCCAT TTCATGGCCG
CTGGCCATCT CTTTCCTGAT CACCGCGGCG ATAACGCTGC TCCTGTACTG GTTCCTGATG
AAGACCGACA CGGGTCAGGC GATCCGGGCA ACGGCCCAGG ACCGGGAAGC GGCCCAGCTC
ATGGGGATCA ACGTGAAGCG GATGTCAATC CTGGCCTTCG GCATGGGTGC GGCCCTGGCC
GGCACGGCTG GTGCGCTCAT CTCCCCTACC TACTACATCT TCCCCCAGAT CGGGAGCACC
TTCACCCTCA AGGCATTCGT CATCACGGTT CTCGGGGGAA TGGGGAGCAT CGTGGGGGCC
ACCATCGGCG GCGTCATCAT CGGGGTGGCG GAGTCCCTCG GGGCCGTCTA CATCTCCTCC
GGCTGGAAGG ACGTGGTCGT GTTCGTCCTC TTCCTCCTGG TGCTTCTCTT CAAGCCGGCG
GGTCTGCTCG GCAAATCCAA AATGTAG
 
Protein sequence
MTIFLQSLIS GILIGGVYAL IGIGLTIIFG VMRVINFAHG DIMMIGMYLT YNFFSLAGVD 
PFVSIALTIP LMFLFGAILQ KTFINRVLGA LPQNQILLTI GLGLIMSNTM MFIYTSDYKI
LTTSYSSSSF NIGTISISWP LAISFLITAA ITLLLYWFLM KTDTGQAIRA TAQDREAAQL
MGINVKRMSI LAFGMGAALA GTAGALISPT YYIFPQIGST FTLKAFVITV LGGMGSIVGA
TIGGVIIGVA ESLGAVYISS GWKDVVVFVL FLLVLLFKPA GLLGKSKM