Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2006 |
Symbol | |
ID | 2688083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2199786 |
End bp | 2200652 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637126697 |
Product | branched-chain amino acid ABC transporter, permease protein |
Protein accession | NP_953055 |
Protein GI | 39997104 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.766894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATTT TCCTCCAATC GCTCATCAGC GGCATTCTGA TCGGCGGCGT CTACGCCCTG ATCGGCATAG GACTCACCAT CATCTTCGGT GTCATGCGGG TCATCAACTT CGCCCACGGC GACATCATGA TGATCGGCAT GTACCTGACC TATAACTTCT TCTCCCTGGC GGGGGTCGAT CCGTTCGTCT CCATCGCCCT CACCATCCCG CTCATGTTCC TCTTCGGAGC CATTCTCCAG AAAACATTCA TCAACCGCGT GCTCGGAGCC CTGCCCCAGA ACCAAATACT GCTTACCATC GGCCTGGGAC TGATTATGAG CAACACGATG ATGTTCATCT ATACCTCCGA CTACAAGATC CTGACTACAT CTTATTCGTC GAGCAGCTTC AATATCGGCA CCATCTCCAT TTCATGGCCG CTGGCCATCT CTTTCCTGAT CACCGCGGCG ATAACGCTGC TCCTGTACTG GTTCCTGATG AAGACCGACA CGGGTCAGGC GATCCGGGCA ACGGCCCAGG ACCGGGAAGC GGCCCAGCTC ATGGGGATCA ACGTGAAGCG GATGTCAATC CTGGCCTTCG GCATGGGTGC GGCCCTGGCC GGCACGGCTG GTGCGCTCAT CTCCCCTACC TACTACATCT TCCCCCAGAT CGGGAGCACC TTCACCCTCA AGGCATTCGT CATCACGGTT CTCGGGGGAA TGGGGAGCAT CGTGGGGGCC ACCATCGGCG GCGTCATCAT CGGGGTGGCG GAGTCCCTCG GGGCCGTCTA CATCTCCTCC GGCTGGAAGG ACGTGGTCGT GTTCGTCCTC TTCCTCCTGG TGCTTCTCTT CAAGCCGGCG GGTCTGCTCG GCAAATCCAA AATGTAG
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Protein sequence | MTIFLQSLIS GILIGGVYAL IGIGLTIIFG VMRVINFAHG DIMMIGMYLT YNFFSLAGVD PFVSIALTIP LMFLFGAILQ KTFINRVLGA LPQNQILLTI GLGLIMSNTM MFIYTSDYKI LTTSYSSSSF NIGTISISWP LAISFLITAA ITLLLYWFLM KTDTGQAIRA TAQDREAAQL MGINVKRMSI LAFGMGAALA GTAGALISPT YYIFPQIGST FTLKAFVITV LGGMGSIVGA TIGGVIIGVA ESLGAVYISS GWKDVVVFVL FLLVLLFKPA GLLGKSKM
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