Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1986 |
Symbol | |
ID | 2686155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2177234 |
End bp | 2178442 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126677 |
Product | glycosyl transferase domain-containing protein |
Protein accession | NP_953035 |
Protein GI | 39997084 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTCT GCGCCTTCTT TGTCGAGGTG TACCACCAGG AGCGGGAGCT GACCCCGCTG GATCTCATCG GGCGCATCAG CATCGAGCTC GTTCTGGCGT TTTTTGTCCT TTCGGCGCTT TATTTCTTCC TGCCGATCGT TATGGACGGA CGGGGCGTGC TCATGATTGC CACGGTGGTA TTCGGATTTT TCCAGTTCCT CTGGCATGCC GGCAGCAGGG GGGGCTTCAT ATTCCCCTCG TTCGCCAAGC GAGTGCTTAT CCTCGGTACC GGTCCCCTGG CAAACCAGAT GGGCAGCCTC GTCACGGCCT CGGGCGCCCG GTACGTGCTT TCCGGCTACG TGGCCTGCTC CCGTGAGCCG GTCTATGTCC CGGCCCAATC CATCGTCGGG AGCGAGGACG GCCTCTACGA AACGGTTCGT CGCGCGCGGG CCCACAAGAT CGTCGTCTCC CTGGGCGAGC GCCGCGGCGT CTTCCCGCTC AAAGATGTTC TCAACTGCAA GCTGAGCGGA GTGGAGGTCA TGGACGCTCC CTCCTTTTAC GAGCGGGTCA CCGGCAAGCT GCTCATCGAG AGCATCAACC CCAGTTGGTT CATCTTCTCG TCCGGTTTCC GCGTAACCGC CCTCAACCGC CTCCTGAAGC GGGCTCTCGA CATTTTCTGC GCACTCTTGG GCGGGGTGCT CTTCCTGCCG TTCCTGCCGA TTGTTGCCTT GGCCATCCGG CTTGACTCGC CCGGCACGAT CCTTTTCCGG CAGGAGCGGG TCGGTGAGCG GGAAAAGCCG TTCCATCTTT TCAAATTCAG GACCATGCGC CAGGACGCCG AGAAGGGGAC GGGTGCGGTC TGGGCGCAGA AGGATGATCC GCGCGTTACC AAGCTCGGCC GTTTTCTCCG CAAGAGCCGC ATTGACGAGA TACCCCAGTT GTACAACGTT CTGATCGGCG ACATGAGCCT GGTGGGACCC CGGCCGGAGC GTCCCGAGTT CGTGGAGCAG CTCAAGAAGG TCATTCCGTA CTATTCCGAA CGCCATTTCG TCAAGCCGGG CGTGACGGGG TGGGCCCAGG TACGATATCC CTACGGGGCA TCGGTGGAAG ACGCCGTTGA AAAGCTGCGC TACGATCTCT ACTATATCAA GAATCTGTCA GTTGCCTTTG ATATAATGAT TATCTTTGAA ACCGTGAAGG TCGTACTGTT CCAGCGGGGG GGGAGGTAA
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Protein sequence | MLFCAFFVEV YHQERELTPL DLIGRISIEL VLAFFVLSAL YFFLPIVMDG RGVLMIATVV FGFFQFLWHA GSRGGFIFPS FAKRVLILGT GPLANQMGSL VTASGARYVL SGYVACSREP VYVPAQSIVG SEDGLYETVR RARAHKIVVS LGERRGVFPL KDVLNCKLSG VEVMDAPSFY ERVTGKLLIE SINPSWFIFS SGFRVTALNR LLKRALDIFC ALLGGVLFLP FLPIVALAIR LDSPGTILFR QERVGEREKP FHLFKFRTMR QDAEKGTGAV WAQKDDPRVT KLGRFLRKSR IDEIPQLYNV LIGDMSLVGP RPERPEFVEQ LKKVIPYYSE RHFVKPGVTG WAQVRYPYGA SVEDAVEKLR YDLYYIKNLS VAFDIMIIFE TVKVVLFQRG GR
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