Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1985 |
Symbol | |
ID | 2688139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2176355 |
End bp | 2177203 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637126676 |
Product | outer membrane protein, putative |
Protein accession | NP_953034 |
Protein GI | 39997083 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTGA AATTTCTGAT CTGTGCCCTG TCCCTGCTGT TGCCGATGCT CGCGTGGAGC GCGGACTATG TCATCGGCGA AGGGGACGGT CTCGATATCT CCGTCTGGGG AGTGAAAGAG CTCAATGTCG GAGTCAAGGT CCGACCCGAC GGGAAGATCA CCATCCCCGG CCTGGGAGAT GTGGTGGCAA GCGGCTTTAC CCCGGCCCAG CTGCAGGCTG ATCTGGCGCA TCGGCTCAAA GAACTGGTGA AGAACCCCAT AGTGACAGTT ACGGTACGAG AGATAACCAA CAGCAAGGTC TACATTTTCG GTGGCGGCGT GCAGTCCGGT GTGGTTGACC TGAACCGCCG CACCACGCTG CTCCAGTTAC TCTGCTCCAT CGGAAACGTC GGTGCCGGCG ACGGCAAGGG GGGCGGTTCC GCTGCCGGTC CTTCCACCAA GGTGGCCGAC TACCGCAAGG CCTACGTTCT GCGCAACGGC AAAAAAGTGA AGGAGGATTT CTACCGGCTC TTTATAACCG GCGATACGAG CGAAGATATC GTCATCGAGT CCGGCGACGC CATCTTCATC CCGCAGGCAC AGGAAAAGAA CGTGTACGTC CTCGGCGCTG TCACCAATCC CCGCTTCATC GAATACCGCG AGGGGATGAC CGTCATGGAG GCCATTCTCG AATCGGGCGG TTTCACCAAA TTCGCCCGCC AGAACGATAC GGTGATCCGC AGAAGGGACG GCGACAAAGA GGCACTTATC GAGGTGAAGG CCAAGGATCT GGTCAAGGAC GGCGACCTGA GCCAGAACGT AAAGCTCAGC CCGGGAGATT ACATCATCGT TAAGGAAGGG ATGTTCTGA
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Protein sequence | MRLKFLICAL SLLLPMLAWS ADYVIGEGDG LDISVWGVKE LNVGVKVRPD GKITIPGLGD VVASGFTPAQ LQADLAHRLK ELVKNPIVTV TVREITNSKV YIFGGGVQSG VVDLNRRTTL LQLLCSIGNV GAGDGKGGGS AAGPSTKVAD YRKAYVLRNG KKVKEDFYRL FITGDTSEDI VIESGDAIFI PQAQEKNVYV LGAVTNPRFI EYREGMTVME AILESGGFTK FARQNDTVIR RRDGDKEALI EVKAKDLVKD GDLSQNVKLS PGDYIIVKEG MF
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