| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1982 |
|---|
| Symbol | |
|---|
| ID | 2688156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2172685 |
|---|
| End bp | 2173866 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637126673 |
|---|
| Product | general secretion pathway protein-related protein |
|---|
| Protein accession | NP_953031 |
|---|
| Protein GI | 39997080 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCGA GAATCATGTA CGAGGCCTAT TTCAACCTGA CAACTAAACC GTTCGAACTG
CTCCCGAACC CCGACTTCAT CTTTCCGAGC AAATCCCACA AGCGGGCGCT CATGTACCTT
GATTACGGCA TCAGCGAGCG GGCCGGCTTC ATCCTGCTCA CGGGCGACAT CGGGACCGGC
AAGACCACCC TCATTCGCAA CATGATTCAG CTCAAGGATG AACGGACAAT CATCTCCCGC
ATCTTCAACA CGCGGGTGGA GCCCGAACAG CTTCTGGCCA TGATCTGCCA TGACTTCGGC
ATTCCGGCCG AAGGCAGGGG CAAGGTTGCT CTCCTCAACG AACTGAACGA CTACCTGATT
GAGCAGTTCG CCCTCGGCAA CAGGCCGGTG CTCATCATCG ACGAGGCCCA GAATCTTTCC
GCCGATCTTC TGGAAGACAT CCGCCTCCTT TCCAACCTTG AGACCAGCGA TACCAAGCTG
CTGCAGATCG TTCTCGTGGG GCAGCCGGAG CTTCGGGAAG TCCTTGCCCT GCCGCAGCTT
CTCCAGCTCC GTCAGAGGAT CAGCATCAAC TGCCACATAA GCCCCCTGTC CCGAGAGGAA
ACCGAAGGCT ATATCTTCCA TCGCCTTGAC CGGGCCGGCA ATCGTAATGC CGTTGCCTTT
TCGAGCGATG CGCTCGATAT CGTGTACCGT TACAGCAGGG GCATCCCGCG GCTCGTTAAC
ATCATCTGCG ATTTCATCCT CCTTTCCGCC TTTGCCGAGC AGACAACCGA GATACCGGGC
GAGATGGTCC GCGACATCAT CGGCGACCTG GATTTCGAGA ACCATTACTG GGGGGGAGCG
GAAGTGGCCG CTTCCGAGCG CGCACCGGAA GCGGCCCGGT TGGCGCCGGG TCGTTCCGAC
GAGGCCACCG AGCTTGTGGC TACCCTGCGT GCCGTAATCG ACCGGCTTGA ATCCCTTGAG
GGAGACTTTG CCCGCATGAG CCGCGGCGTG CTCGATGAGA TGAGTGAAAA AGTCGCTTCC
CTGGAGAACG CCTTCCGGTT CCACGTGGAT GAGACCGACA GCCATATCTC CGAAATCAGA
AGGCGGATCG AAAAGGTCCA GAACCTGGAG GTCGGGACCA CCGGCGAATG CCAGCCGCAG
GACTCTCCCA AAGGGCTGCT GAAGAGGATG TTCGGTGCCT GA
|
|---|
| Protein sequence | MKARIMYEAY FNLTTKPFEL LPNPDFIFPS KSHKRALMYL DYGISERAGF ILLTGDIGTG
KTTLIRNMIQ LKDERTIISR IFNTRVEPEQ LLAMICHDFG IPAEGRGKVA LLNELNDYLI
EQFALGNRPV LIIDEAQNLS ADLLEDIRLL SNLETSDTKL LQIVLVGQPE LREVLALPQL
LQLRQRISIN CHISPLSREE TEGYIFHRLD RAGNRNAVAF SSDALDIVYR YSRGIPRLVN
IICDFILLSA FAEQTTEIPG EMVRDIIGDL DFENHYWGGA EVAASERAPE AARLAPGRSD
EATELVATLR AVIDRLESLE GDFARMSRGV LDEMSEKVAS LENAFRFHVD ETDSHISEIR
RRIEKVQNLE VGTTGECQPQ DSPKGLLKRM FGA
|
|---|
| |