| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1980 |
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| Symbol | |
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| ID | 2688172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2170504 |
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| End bp | 2171385 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637126671 |
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| Product | polysaccharide deacetylase domain-containing protein |
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| Protein accession | NP_953029 |
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| Protein GI | 39997078 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGGATT ACTTCCAGGT AAGCGCCTTT GAAGGGTGCT CTCCTCCGGA ACAGTGGGAC
TGTTTTCCCC TTCGGGTGGA GAAGAATACG TCCCGTATCC TCGACATGCT CGATGCCGGG
GGCGTTAAGG CCACGTTCTT CGTCCTCGGC TGGGTGGCGG AACGCGCGCC GGAACTGGTA
AAAGAGATAG CACGACGGGG CCACGAGGTT GCCAGCCACG GCTATGGTCA CCGCCGGGTT
TCTACCCAGA CCAGGCAGGA ATTCCGGGCC GACATCCGCA GAAGCAAGGC GCTGATCGAG
AATCTTACCG GCAGTCCCGT CCACGGCTAT CGCGCGCCCA GCTATTCGAT CTCACGAAAA
GTCCTCTGGG CCTTCGACGA ACTGCTCGAC GCCGGTTACT GTTACGACTC CAGCGTCTTT
CCCGTCCGCC ATGACCTCTA CGGCATCCCT GACTGGCCGA GCCACCCCTT TCGGGTCGTG
AAGGGGAACG GTGGGTGGGA GCCGTCCGCA ACTGCCCCTG ACAGCGAAGA CGGCATCACC
GGCCAGATGC CGTCCATCCT TGAAATGCCG ATAACCACCC TTACCCTCGG GGGCAGGAAC
ATTCCCATTG CCGGGGGCGG CTATTTCCGC TTTTTCCCCT ATGCCTTCAC CCGGTGGGGA
CTGCGGCGCA TCAACCGGCG TGAGAAACGG TCGTTCATCT TCTATCTCCA TCCCTGGGAG
ATGGACCCCG ACCAGCCCAG AATGGCCGGT GCTCCGGCCA AGAGCCGCTT TCGGCATTAC
CTGAACCTGC ACCGGACCGA AGAGCGGTTC CGCCGACTGT TGGGAGAATT TCGCTTCACC
CCCGTGATGG ACCTTCTGGC CGTAGGGATG GTTGAACCAT GA
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| Protein sequence | MEDYFQVSAF EGCSPPEQWD CFPLRVEKNT SRILDMLDAG GVKATFFVLG WVAERAPELV
KEIARRGHEV ASHGYGHRRV STQTRQEFRA DIRRSKALIE NLTGSPVHGY RAPSYSISRK
VLWAFDELLD AGYCYDSSVF PVRHDLYGIP DWPSHPFRVV KGNGGWEPSA TAPDSEDGIT
GQMPSILEMP ITTLTLGGRN IPIAGGGYFR FFPYAFTRWG LRRINRREKR SFIFYLHPWE
MDPDQPRMAG APAKSRFRHY LNLHRTEERF RRLLGEFRFT PVMDLLAVGM VEP
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