| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1979 |
|---|
| Symbol | |
|---|
| ID | 2688182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2169635 |
|---|
| End bp | 2170507 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637126670 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_953028 |
|---|
| Protein GI | 39997077 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02602] eight transmembrane protein EpsH (proposed exosortase)
[TIGR03109] exosortase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGA ACGAGATGAC CACGAACGGG AACATATCCA TGGGTGGTAA AAGCGCCGGG
GCCAGGCTCG GACTGCTTGC CCTGTTCTGC TGCGCCTTTG TGGCGGCGTT TCTGCCGGTG
ATAACCGGAC TGGTGCAGGC ATGGTCCGGC TCCGAGGACT ATTCCCATGG GTTTCTGATC
GCTCCGCTGT CGGCCTATAT CATCTGGCAG AAGCGGGAGA TCTTCTCCCG CCCGGGTTCC
GCCGGCTCTT CGGGCGGGCT GGCGTTGGTG GTTCTGTCTC TCGCGGCCTA TCTGTTCGCC
CATGTCGCCG GTATTACGAC CCTGGCCGCC CTGTCCATGG TTGCATTTCT GTGGGGCACG
GTTGTGTACC TGTTCGGTTT CCGTGTCTAT TGCCAAGCCT TGTTCCCCTT GACACTGCTC
CTGTTCATGA TTCCGATCCC CGCGCAGATC TATGCAGCCC TCACCATCCC GCTTCAGCTC
ATCGTGAGCA AACTGGCGGT GGGGCTGGCA TTGGCGACAG GTATCCCGGT GTATCGCGAG
GGCAATGTCA TTCACCTTGC CCAGGGGACA TTTGAGGTCG TGCAGGCCTG CAGCGGTCTC
CGCTCTATCA TGGCGCTACT GACCATCGGT GCCGTTCTTG GCTACTTTTC TCTCACCTCG
AATTTGCTGC GGGCCATCCT GTTCGCGACC GGCATTCCCA TTGCCGTTGC CGTGAACATT
CTGCGGGTAT TCGTGCTTAT CGTCGCGTTT CATTATCTGA ACATCGATCT TGCCAAAGGG
ACCGCTCATA CCGTCCTTGG ACTGGCCCTG TTCGTGGTGT CGTTCGGCCT GTTTCTGCTG
ATCCGGAAGG GGTTGTCGCT ATGCGATCGG TGA
|
|---|
| Protein sequence | MNTNEMTTNG NISMGGKSAG ARLGLLALFC CAFVAAFLPV ITGLVQAWSG SEDYSHGFLI
APLSAYIIWQ KREIFSRPGS AGSSGGLALV VLSLAAYLFA HVAGITTLAA LSMVAFLWGT
VVYLFGFRVY CQALFPLTLL LFMIPIPAQI YAALTIPLQL IVSKLAVGLA LATGIPVYRE
GNVIHLAQGT FEVVQACSGL RSIMALLTIG AVLGYFSLTS NLLRAILFAT GIPIAVAVNI
LRVFVLIVAF HYLNIDLAKG TAHTVLGLAL FVVSFGLFLL IRKGLSLCDR
|
|---|
| |