| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1958 |
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| Symbol | |
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| ID | 2688254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2147230 |
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| End bp | 2148114 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637126649 |
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| Product | polysaccharide deacetylase domain-containing protein |
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| Protein accession | NP_953007 |
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| Protein GI | 39997056 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.15292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCACG AGGTGTTGCC TGACGATATT GCCTTGCCCG CGTGGACGGT CGTCCGGGAG
TCTGATTTCC ATCGGCAAAT GCAATGCTTG GCAACGCATT TCGATGTCGT GTCTCTTGAC
GAGGCCGTGG ACCGGGTTTC CGGAAAGGCT GCGTCAACGC GGCCATTTGC CGTTGTGACG
TTTGATGACG GCTACCAAGG GAATGCGCGT ACCGTGTTGC CGATAATGGA GCGGATGGGG
CTTCCCTTTA CCGTTTATGC GGCAACCAGG GCAATCGTCG AGAATGATCT CTACTGGTAC
GACCGGGTCA TAAGCGCACT GGCCGTCAAT AGGGAGATAC GGGTAACGGT GAAGGTGAAT
GGCACCCCGG AGAGCTACAC AATCCCTTCT TCCGGAGAAG ATGGTCGCTG GGTGCATGTG
CAGAGGCTCC TGAGCCGCAT GAAGCTCATG CCGGCGGCAG AGCGGGACGC GACGGCAAGC
GAAATTGCCG CCGACCTCAG CTTGTCGGAC TCGCCCTTGA AGATGTTGAC CGAGGAGGAG
TTACGGCTGC TTTCTGCATC GAGTTGCGTC ACTATTGGCT GTCATACCCA CGGTCATGAA
CTGCTCGATC GGATCAGCCC CCGTGAGGCG GGCGAGACGC TACGTCTTTC AAGCGACCTG
CTCACGCGTA TCACGGGAAC GCATCCTCGA CATTTTGCCT ACCCCAACGG CAACGTTAAT
CAGGTTGTAC GCGGCATTGT TCAACAGTCT GGATTTGAAA CCGCTGTCAC AACTGCATCA
GGCTTATGGT CGGGAGAGGT GAGCATGATG GAGATTCCGA GAGTTGGCGT CGGACGATTC
GAAACTATTA CCAGTTTTAA AGCACTCATC TCACGATGGG TGTAA
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| Protein sequence | MYHEVLPDDI ALPAWTVVRE SDFHRQMQCL ATHFDVVSLD EAVDRVSGKA ASTRPFAVVT
FDDGYQGNAR TVLPIMERMG LPFTVYAATR AIVENDLYWY DRVISALAVN REIRVTVKVN
GTPESYTIPS SGEDGRWVHV QRLLSRMKLM PAAERDATAS EIAADLSLSD SPLKMLTEEE
LRLLSASSCV TIGCHTHGHE LLDRISPREA GETLRLSSDL LTRITGTHPR HFAYPNGNVN
QVVRGIVQQS GFETAVTTAS GLWSGEVSMM EIPRVGVGRF ETITSFKALI SRWV
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