Gene GSU1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1928 
Symbol 
ID2685383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2107340 
End bp2109721 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content60% 
IMG OID637126619 
Productsensor histidine kinase/response regulator 
Protein accessionNP_952977 
Protein GI39997026 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCT GCGTGACGGT GCTGATACTG GCGTTTGCCG GGTTCGTGGT GCGGGACCTG 
ACGATGGAGC CGCCAGAACT TCTGAGGCGG TTGGAGATCA TTGCAGGTGT TGTCGGTGAC
AAAAGTATGA CCAGCATCGT TTTTAACGAT GTCCGGGCTG CCTCGGAGAT GCTGGATGTC
CTCAAGACGG ATCCCCACAT CATCGTTGGG CGCATCTACC TCAAGGATGG CTCGATTTTT
GCGCATTACC GACGGAAGGG GTCACTGGCA TCGCCTGCCG CAAACTCGTC GGCGGATGAC
GCAACCACCT GGATCGAGTA TCGGCAACAG ATGGTGGAGA AGATGGGAGA TTCCCTTCCC
AGTCATCATT GGCATGGCGA CCACCTCGAT ATGTTCAGGC CGATAATACT AGACGGGGAG
GTCATCGGCA CCGTCTATCT GCGGGGCGAT TACCGGGAGA TATACTCGCG TTTGCGCTGG
TATGCGGTAA GCGGAGGAGT GCTGCTGCTT ATGCTCTCCG CCTTTGCCTA CGTTCTGTCT
TCAAAGCTGC AGCGACGGGT TTCTGCGCCG ATTGCCGAAT TGCTTGAGGT TACGCGGCGT
GTTGCTGAGG AGCACAACTA CTCGGTACGG GCCGCGGGGG GAGGGGTCGA CGAGATCGGC
GAACTCGTGT CCGGCTTCAA TAGGATGCTT CAGATCATCG AAGAAAGTGA CGCGAATCTG
AAGCGGAACC GCGAAGACCT GGGGGAGGAA GTCGCCCGCC GCACCGAAGA TCTGTCGCGG
ACCAACGAGG AACTGGAGCG GGCTGTTGCC GACCTGAGCA AGGCGAAAGA AGCCGCAGAT
TCCGCCAGTC AGTCAAAATC GCGGTTCCTG GCCAATGTGA GTCACGAGAT CCGCACGCCC
ATGAACGGCG TCCTCGGCAT GGTCAGTCTC CTTCTCGAAA CCGACCTTCA AGCCAAACAG
CGCGAGTATG CTGAGATCAT CCGGTCATCC GGTGAACTGC TCATGCAGGT CATTAACGAT
CTGCTCGATT TTTCCCGTAT TGAGTCGGGA AAACTGAAGA TGGAGCAGCT GCCCTTTGCG
GCGCGCCGTG TCATTGAAGA AATGGCCACC ATTTATGGTG AGCGAGCCCG CCAGAAGGGG
GTCTTCCTTG AATACTCCAT GGCAGGAGAG GTGCCCGACC GCCTTCTGGG CGACCGCCAC
CGGCTCCGTC AGGTGTTGGG GAATCTTCTC GACAATGCCG TGAAATTCAC CCTCAAGGGG
ACAATCACAC TGACCGTTCG CGGGAGCGTG GAGGGTGGAG TCTGCCGACT CAGCTGCATC
GTAAGCGATA CGGGGATCGG CATTCCCCAG GATATGCTGC CCCGTTTGTT CCACCCGTTC
ACCCAGGCCG ACGACTCCAA TACCCGCCGT TTCGGAGGCA CGGGGCTGGG GCTCGCCATT
GTCCGCCATC TTGTGGAGCT CATGGGGGGC ACGGTCAGTT GCGACAGTGA GCCGGGGTGC
GGATCCGTTT TCCGGTTCAC GGTCGCCCTG TCGGTGGTGC CGGATACGGG TGAGCCGGAA
CCGGAACCGT CCCATGAAGC TGCTGGGTCT TTTCCTTCTC GCCTATTGCT GGCAGAGGAC
AATGCCGTCA ACCGAATGGT GTTGCAGGAG ATGCTCCGAA GCCTCGGGGC GGATGTCATG
GTGGTCTCTG ACGGAGCCGA AGCCGTGGCT GCCGTCTCGG CTGAGCGGTT CGACATGGTG
TTCATGGATT GCCAGATGAC CGGTATGAAC GGGATTGTCG CCACAGCCGA AATTCGCCGC
ATGGAGCGTA CCGGACAGCT CACAGGCCGA ACTCACATCA TCGCCCTTAC CGGAAGGGTG
GAGGTGGGCG ACCGGGAGGC CTGTCTGGCG GCGGGAATGG ACGATTACCT CATCAAGCCG
GTTATGCGCC ACGATCTGGT GATGGTGCTC CGGCGCTGGC TGTCCCCGCA TGACGAGACG
ATGCCATCCG CGGCATACGA CAAGGCTCCC GGGGGAGTGA GTGAAGAGGC CGAATGTCTT
CTCGACCGGG ATATTCTGGA TGGCATTCGT GCCTTGGAGG CGGGCGGGTC CGAGGGGCTC
CTCGACCGTG TCATTGATAT TTTTATTTCC GATTCGCCAC GGCACCTGCG TGATATGAGG
GAGGCCCTGG CGCGGGAGAA CCTGCCTGCC GCCCGACGGG CTGCACATAC TCTCAAATCC
GGGTGCCTCA ATCTGGGAGC CGTTGCCCTC GCAGCCTTAT GCGGGGAGAT GGAGCGACTC
GGCGAAGGAG AAGACGTCTT GCCGTTGCGG CTGCTCTCAC GTATGGAGTC GGAATTCATA
AGGGTGTGCG CCGCGCTGGA GCGCGAGCGC ACCGGGGTGT AA
 
Protein sequence
MATCVTVLIL AFAGFVVRDL TMEPPELLRR LEIIAGVVGD KSMTSIVFND VRAASEMLDV 
LKTDPHIIVG RIYLKDGSIF AHYRRKGSLA SPAANSSADD ATTWIEYRQQ MVEKMGDSLP
SHHWHGDHLD MFRPIILDGE VIGTVYLRGD YREIYSRLRW YAVSGGVLLL MLSAFAYVLS
SKLQRRVSAP IAELLEVTRR VAEEHNYSVR AAGGGVDEIG ELVSGFNRML QIIEESDANL
KRNREDLGEE VARRTEDLSR TNEELERAVA DLSKAKEAAD SASQSKSRFL ANVSHEIRTP
MNGVLGMVSL LLETDLQAKQ REYAEIIRSS GELLMQVIND LLDFSRIESG KLKMEQLPFA
ARRVIEEMAT IYGERARQKG VFLEYSMAGE VPDRLLGDRH RLRQVLGNLL DNAVKFTLKG
TITLTVRGSV EGGVCRLSCI VSDTGIGIPQ DMLPRLFHPF TQADDSNTRR FGGTGLGLAI
VRHLVELMGG TVSCDSEPGC GSVFRFTVAL SVVPDTGEPE PEPSHEAAGS FPSRLLLAED
NAVNRMVLQE MLRSLGADVM VVSDGAEAVA AVSAERFDMV FMDCQMTGMN GIVATAEIRR
MERTGQLTGR THIIALTGRV EVGDREACLA AGMDDYLIKP VMRHDLVMVL RRWLSPHDET
MPSAAYDKAP GGVSEEAECL LDRDILDGIR ALEAGGSEGL LDRVIDIFIS DSPRHLRDMR
EALARENLPA ARRAAHTLKS GCLNLGAVAL AALCGEMERL GEGEDVLPLR LLSRMESEFI
RVCAALERER TGV