| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1917 |
|---|
| Symbol | uppS |
|---|
| ID | 2686735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2096378 |
|---|
| End bp | 2097118 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637126608 |
|---|
| Product | undecaprenyl pyrophosphate synthase |
|---|
| Protein accession | NP_952966 |
|---|
| Protein GI | 39997015 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGCC TCATACCCGA TAAACTCCCC AGGCACTTGG CCATTATCAT GGACGGTAAC
GGCCGCTGGG CTCAGGAACG GATGCTCACG CGGATCATCG GCCACCAGAA AGGGGTGGAA
ACGGTCAGGA TCATCGTCGA GGAGTGTTCC CGGCTCGGTA TCGGATATCT GACGCTATTC
GCTTTTTCAG CTGAGAACTG GCTTCGGCCA AAAACCGAGG TCAAGGCGCT GATGGCCCTG
CTGAAGAAGT ACATTGCATC TGAGGCTGCG CGGATGGATG CGAACAATAT CCGGTTTAAT
GTCATCGGCA ACCGTGATGA ACTGCCGCCG GATGTGAATA AAGCCGTTCA GGGAGCAATC
GACCGGACCA GCGGCAATAC CGGTATGATC CTTACTCTGG CACTTTCCTA CGGCGCGCGC
CAGGAGATCA TGACGGCGGC TACGCGGATA GCCTCCGATA TTGCTTCCGG CGTGCTCAAG
GCCGATGATC TCAGTGAGAC TGCCTTTGCC TCGTATCTGT TCACCAGCGG GCTCCCTGAT
CCCGATTTTC TCATCCGCAC GAGCGGAGAG ATGAGGATCA GCAATTTTCT TCTTTGGCAG
CTGGCCTATA CGGAGTTCTA CTTCTCCTCG GTCAACTGGC CAGAATTCAC GCCGGAGGAA
CTGTACCGGG CATTGAGCGA TTACCAGGCC CGCGAGCGGC GTTTCGGTCG CACAAGCGCC
CAGATCAACA CGAGGAGCTA G
|
|---|
| Protein sequence | MHGLIPDKLP RHLAIIMDGN GRWAQERMLT RIIGHQKGVE TVRIIVEECS RLGIGYLTLF
AFSAENWLRP KTEVKALMAL LKKYIASEAA RMDANNIRFN VIGNRDELPP DVNKAVQGAI
DRTSGNTGMI LTLALSYGAR QEIMTAATRI ASDIASGVLK ADDLSETAFA SYLFTSGLPD
PDFLIRTSGE MRISNFLLWQ LAYTEFYFSS VNWPEFTPEE LYRALSDYQA RERRFGRTSA
QINTRS
|
|---|
| |