Gene GSU1915 details

Gene Information

• Locus tag: GSU1915
• Symbol: dxr
• ID: 2688386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 2094368
• End bp: 2095528
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637126606
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: NP_952964
• Protein GI: 39997013
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACA TCACCATACT CGGATCAACA GGCTCCATTG GGGTCAGCAC GCTGGAAGTT 
GTCTCCGCCC ACCCCGACCG CTTCCGTGTC GTTGCTCTCA CTGCCGGCAA CAACCTTGAG 
ATGCTGAGAC AGCAGATCGA GACGTTCCGT CCGCAAATGG TCAGCGTTCT GAGCGAAAAA 
CTGGCCGTTG AACTGGACCG GAGTCTGCCG GGGTACAAGC CGGAGATCCA TTATGGCGTT 
GAAGGGCTTA TCGCCGCAGC CACGGCGGGG GATGCCCATA TGGTTGTTGC TGCAATAGTC 
GGTGCCGCCG GGCTGGTTCC GACCGCTGCG GCTATACGGG CTGGCAAAGA TGTGGCTCTT 
GCCAACAAGG AAACCCTGGT CACTGCCGGC AGGCTCATCA TGGATCTTGT GCGGGACAAG 
AATGTCAGAC TCTATCCCGT TGACAGTGAA CACAGCGCCG TGTTCCAGTC CATGGAAGGA 
CAGAGCCGCA AGGATGTATT GCGGATCATC CTGACCGCTT CGGGCGGGCC CTTCCTGAAT 
CTGCCGCTTG ATCAGCTGTC CCGGGTTTCG ATCGACGACG CCCTGAACCA CCCCAACTGG 
TCCATGGGGC GCAAGATAAC CATCGATTCG GCCACCATGA TGAACAAGGG GCTGGAGGTG 
ATCGAGGCTC GCTGGCTTTT CGATACGCCG GCGGAGCGGA TCGACGTGAA CATTCATCCC 
CAGAGCATCA TCCATTCCAT GGTCGAGTAT GTGGACGGCA GTGTCATGGC TCAGTTGGGT 
GTTCCCGACA TGAAGGCTCC CATCGCCTAT GCGCTGACCT ATCCCGAGCG GGTCCCCACC 
GGGGTGAATC CCCTTGACCT CACCGCTCTG TCCGGGCTCA CCTTTTTCAA GCCGGACTAT 
CGCCGCTTTC CCGCCCTGAA GCTTGCCTAC GACGCTTTGG CGGCAGGGGA AAGCATGCCC 
GCGGTCATGA ACGCTGCCAA TGAGGTGGCG GTAGAGGCTT TTCTGTCCGG GGTGATCGGA 
TTCATCGACA TTGCCGCCAC TATCGCACGA ATCATGGACG CCCATGAGGC ACACACCCTT 
TCCACCATCG AGGAGGCGCT CATCACCGAT CGTTGGGCGC GTGAGAAGGC GCGTGAGCTC 
GTAGGGCTCG TCCGCCGCTA G 

 

Protein sequence

MKNITILGST GSIGVSTLEV VSAHPDRFRV VALTAGNNLE MLRQQIETFR PQMVSVLSEK 
LAVELDRSLP GYKPEIHYGV EGLIAAATAG DAHMVVAAIV GAAGLVPTAA AIRAGKDVAL 
ANKETLVTAG RLIMDLVRDK NVRLYPVDSE HSAVFQSMEG QSRKDVLRII LTASGGPFLN 
LPLDQLSRVS IDDALNHPNW SMGRKITIDS ATMMNKGLEV IEARWLFDTP AERIDVNIHP 
QSIIHSMVEY VDGSVMAQLG VPDMKAPIAY ALTYPERVPT GVNPLDLTAL SGLTFFKPDY 
RRFPALKLAY DALAAGESMP AVMNAANEVA VEAFLSGVIG FIDIAATIAR IMDAHEAHTL 
STIEEALITD RWAREKAREL VGLVRR