Gene GSU1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1904 
Symbol 
ID2688443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand+ 
Start bp2082217 
End bp2083245 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content54% 
IMG OID637126595 
Productdecarboxylase family protein 
Protein accessionNP_952953 
Protein GI39997002 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0178748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA GCTTTACGCG CACCAATGGC GAAATCGACA CACTCATTGA CACACTGATG 
GAGAAGGCTG GAACCATCCA TCACCCTACC CTGATACGTG AAATGATCAT TTCCGCTCTC 
AAATCGGGCC AGGAAACAAG CTATCCCGCA GACCTCAAAC TGCTCAACAA CACCATGAAG 
GAGATGCGCT ACACAACCAA CGTGTTCGCC CCCTACCGCA ATAGCCGGAA AGTGACCATC 
TTCGGCTCGG CCCGTACGGA GCCCCAGGAG CCGATTTATC AGACCTGCGT CCGCTTTAGC 
CGAAAACTTG CCGACAAGGG GTACATGATT ATCACCGGCG GAGGCCCGGG TATCATGCAA 
GCCGGAAATG AAGGCGCCGG CAGCGACCGC TCCTTTGCCG TAAACATCCG CCTTCCCTTC 
GAACAGAAGC CCAACCCCGT GATGCTCCAG AATCCGCGAC TCATAAATTA CAAGTACTTC 
TTCAACCGGA AAGTCGCCTT TGTCAAGGAG TCGAACGCAA TCGCCGTTTT CCCCGGCGGA 
TTCGGCACGC TTGACGAAGC CATGGAAGTC TTCACCCTCA TCCAGACGGG CAAGACCTCT 
CCCAAACCCC TTGTTCTTAT CGACGACAGT GACGGTTACT GGGATCGCTG GTTCGATTTC 
GTCACCTCGT GCATCCTCGG CAAAGGGTTC ATCTCTGCGG AGGATTTCTC CATTTTCACC 
ATTACCCGCG ACGAGGATGA GGCCATCAGG GTCATCGAAG AGTTCTACCA CAACTACCAC 
TCCCTCCGAT TCTTCGAAGA GAGGCTCATC ATCCGGCTCA ACAAAGAACT AACTCGGGAA 
CAGATCGATG AACTCGAAAA TGAATTCCCC GAATTGCGCC TGCCGGGCAC TCGCATAAGC 
TGCTGCCCCC CACTCCCCGA AGAGGCTGAT GAGCCCGACC TGCTTAAACT GCCTCGCATC 
TCGCTTCAGT TCGACCATCA ACACTACGGG CTCCTTATAG CTTTCATCAG AAAAATCAAC 
ATGTTTTAA
 
Protein sequence
MELSFTRTNG EIDTLIDTLM EKAGTIHHPT LIREMIISAL KSGQETSYPA DLKLLNNTMK 
EMRYTTNVFA PYRNSRKVTI FGSARTEPQE PIYQTCVRFS RKLADKGYMI ITGGGPGIMQ 
AGNEGAGSDR SFAVNIRLPF EQKPNPVMLQ NPRLINYKYF FNRKVAFVKE SNAIAVFPGG 
FGTLDEAMEV FTLIQTGKTS PKPLVLIDDS DGYWDRWFDF VTSCILGKGF ISAEDFSIFT 
ITRDEDEAIR VIEEFYHNYH SLRFFEERLI IRLNKELTRE QIDELENEFP ELRLPGTRIS 
CCPPLPEEAD EPDLLKLPRI SLQFDHQHYG LLIAFIRKIN MF