| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1894 |
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| Symbol | kdsA |
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| ID | 2686233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2071420 |
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| End bp | 2072238 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637126585 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | NP_952943 |
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| Protein GI | 39996992 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase
[TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.342033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGGG AAATTACCAT AGGTTCCGTA AAGATTGGTG GCGACCGACC GCTGGTGCTC
ATCGCCGGCC CCTGTGTGAT CGAAAATGAG GCGGCAACCC TGCGTTGCGC CGAGCGCCTA
ATGACCATCT GCAACGGCGT ATCCGTGTCG CTTGTCTTCA AGGCATCCTA TGACAAGGCG
AATCGCACGT CGGTTACCTC GTTTCGCGGC CCAGGCATGC AGGAGGGGTT GCGCATTCTC
CAGAAGGTGA AAGACTCCCT CGGCATCCCT GTCATCTCGG ACATCCACTC AATCGAGCAG
GTAAAGCCGG CTGCCGAGGT GCTCGACATC ATTCAGGTTC CCGCGTTTCT CTGCCGCCAG
ACCGACCTGG TGGTGGAAGT CGGCCGGACC AATCGGGTGG TTAATGTCAA GAAGGGCCAG
TTCATGGCCC CATGGGACAT GGAGAACGTC GTCGGCAAGA TTCTGTCAAC CGGCAATGAG
CGTATCATCC TGACGGAGCG CGGGGTAACA TTCGGCTACA ACAATCTCGT TTCCGACATG
CGGAGTCTTC CCATCATGCG CCGCATCGGC TTCCCGGTGG TCTTCGACGC CACCCACAGC
GTTCAACTGC CCGGCGGCCA GGGCGGTTCG TCCGGCGGTC AGCGCGAGTT TGTGGAGTAC
TTGTCCCGGG CCGCGGTCGC CACCGGCATC GACGGCATCT TCATGGAAGT CCACGAAGAC
CCCGAAAAGG CCCTGTGCGA CGGCCCCAAC TCGGTGAAGC TCGATGACCT GCCCGCACTG
CTCAAGAAGC TGAAGGCAAT AGACGCCATC GTAAAATAG
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| Protein sequence | MTREITIGSV KIGGDRPLVL IAGPCVIENE AATLRCAERL MTICNGVSVS LVFKASYDKA
NRTSVTSFRG PGMQEGLRIL QKVKDSLGIP VISDIHSIEQ VKPAAEVLDI IQVPAFLCRQ
TDLVVEVGRT NRVVNVKKGQ FMAPWDMENV VGKILSTGNE RIILTERGVT FGYNNLVSDM
RSLPIMRRIG FPVVFDATHS VQLPGGQGGS SGGQREFVEY LSRAAVATGI DGIFMEVHED
PEKALCDGPN SVKLDDLPAL LKKLKAIDAI VK
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