| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1873 |
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| Symbol | pepF |
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| ID | 2686250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 2050853 |
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| End bp | 2052643 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637126564 |
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| Product | oligoendopeptidase F |
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| Protein accession | NP_952922 |
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| Protein GI | 39996971 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.201769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAG ATTTGAATTC CCTGCTCTGG GATACGTCGC CCCTCTACGC ATCCGCAACC
TGTGAAGACA TAGACCGGGA CCTGTCCCGC GGCGCTGCGG AGGCCCAGGC GTTTCGTGAA
CGCTACGCCG GAAAGGTGGC AACCCTTGAT GCGGCTGAGG TGGCAGATGC GGTGCGTCGC
TACGAGGACC TCGGCGAGCT TCTGGCCAAA CCCCAGCTGT ACGCCCACCT CCTCTTTGCC
GCCGACTCGG AGGCCGACGA TCACAAGCGG CTCTCCCAGC GGACTGCCGA GTTCGGCAAT
CTCATGAGCC GCGAGCTTCT CTTCTTCGAC CTGGAGATCA TGGAAATAGC CGATGATCGC
TTCGCCGGGC TGCTGTCCGA CGAGCTCCTC GCCCCCTACC GGCACTACCT GGAAAGCGTG
CGGCGGTTTC GGCCCTACAC CCTCAAGGAA CGGGAGGAAC AGCTCCTGAA AATGAAGAGC
CTCACGGGTA CCGATGCCTT TTCACGGCTC TTCGACGAGT TATCGGCCTC TCTTCGCTAT
CGGATGGAAC TTGAGGGTGA AGAGCGGGAC TTCACCGGCG AGGAACTCCT CGGACTCCTC
CACCACCCTG AGGCCGGGGT GCGTGAACGC GCCTTTGCCA CGTTCCTCAA TCGCCACGAA
GAAAACGGCA TCGTTTTTTC GAGCGTGTTC AACAATGTTG CCCTGGATCA CTCCCAGGAA
CTGGAGTTGA GGGGGTACCG CCACCCCATG GAACCGACGA ACCTGGGCAA TGATATCCCC
GAAGAGGTGG TCAACCGGCT GATGGACGTG TCCGAGGCCA ACTATGGGCT GGCGCGGGAC
TACTTCCGCC TGAAGGCCCG GCTCCTGGGA CTGCCGAAAC TGAAGAACAC CGACGTCTAT
GCCCCCGTTG GGGACAACGA CCGGACGTAC TCCTTTGACG AGGCAAGGGA ACTGGTGCTT
GAAGCCTACG GCCGCTTTCA CCCCCGTTTC GGGGAGATGG CCGCGGCGTT TTTCGACGAG
CGGCGCATCG ATGTCCTCCC CCGCCCCGGC AAGAGTGGCG GAGCATTCTG CATGGGGATG
ACCCCGCACC TCTCCCCCTA CCTGCTCCTG AACTACACCG GCAACCTGCG CGACGTGGCC
ACCCTGGCCC ACGAGCTGGG GCACGGCCTC CACTTCGAGC TGGCCCGGAA ACAGACCATG
CTCAACTACC ATGCCCCGCT GCCTCTGGCG GAAACGGCGT CGGTCTTCGG CGAGATGCTC
CTGACTCGCT TCCTCCTCCA GCGGGAGAGC GACCCGGCCA TGAAAATATC GCTGCTGTGC
GCCAAGATCG AGGACATCAT CGCCACGACC TTCCGCCAGA ACGTGCTCAC CCGCTTCGAG
GAGCGGATGC ACCGGGAGCG GCAGGAGGGC CTCCTCACCT CATCACGGCT ATGCGATCTC
TGGTGGGAGG AAAACGGCAG GCTTTACGGC GATGCCGTGG ACATGATCCC CCCCTACCGC
TGGGGCTGGA GCTATATTTC TCACTTCATC CACGCGCGCT TCTACTGCTA CTCTTACACC
TTTGCGGAGT TGCTGGTTCT TTCCCTCTAC CGCAACTACC TGGAACAGGG AGAACGGTTC
ATCCCGACGT ACCTGTCCAT CCTGGAAAGC GGCGGCTCCC TCTCGCCCGC CGATACGGTC
AGGCCCGCCG GCATCGACCT GGCTGACCCG CATTTCTGGC AGAAGGGATA CGATTTTCTT
GCGGAACTGA TCGAAGAACT GAAGGGGCTG CTGGAACAGC GTCAGCATTG A
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| Protein sequence | MTTDLNSLLW DTSPLYASAT CEDIDRDLSR GAAEAQAFRE RYAGKVATLD AAEVADAVRR
YEDLGELLAK PQLYAHLLFA ADSEADDHKR LSQRTAEFGN LMSRELLFFD LEIMEIADDR
FAGLLSDELL APYRHYLESV RRFRPYTLKE REEQLLKMKS LTGTDAFSRL FDELSASLRY
RMELEGEERD FTGEELLGLL HHPEAGVRER AFATFLNRHE ENGIVFSSVF NNVALDHSQE
LELRGYRHPM EPTNLGNDIP EEVVNRLMDV SEANYGLARD YFRLKARLLG LPKLKNTDVY
APVGDNDRTY SFDEARELVL EAYGRFHPRF GEMAAAFFDE RRIDVLPRPG KSGGAFCMGM
TPHLSPYLLL NYTGNLRDVA TLAHELGHGL HFELARKQTM LNYHAPLPLA ETASVFGEML
LTRFLLQRES DPAMKISLLC AKIEDIIATT FRQNVLTRFE ERMHRERQEG LLTSSRLCDL
WWEENGRLYG DAVDMIPPYR WGWSYISHFI HARFYCYSYT FAELLVLSLY RNYLEQGERF
IPTYLSILES GGSLSPADTV RPAGIDLADP HFWQKGYDFL AELIEELKGL LEQRQH
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