Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1860 |
Symbol | |
ID | 2688548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2037712 |
End bp | 2038455 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126551 |
Product | keto/oxoacid ferredoxin oxidoreductase, alpha subunit |
Protein accession | NP_952909 |
Protein GI | 39996958 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.001057 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACAGG TCTTCAAAAA GCCGGTCAGT CTCAAGGATG TCCAGACCCA CTTCTGTCCC GGGTGCCATC ACGGCACCTT CCACCGCCTC GTGGCCGAGG CCATGGATGA ATTCGGCGTG CAGAAGAAGA CCATCGGGGT TGCCTCGGTG GGGTGCTCCG TTTTTCTCTA CGGCTACTTC GATATCGATG TGGTCGAGGC GCCCCATGGC CGGGCTCCCG CCGTGGCCAC CGGGGTCAAG CGGGCCCGTC CCGACGCCTT TGTCTTTACC TATCAGGGAG ACGGGGACCT GGCCGCCATC GGCACCTCCG AAATCATCCA TGCGGCCAAT CGCGGCGAAG ACATCACTGT TATCTTTGTC AACAACACTA CCTACGGCAT GACCGGCGGC CAGATGGCTC CCACCACTCT GGTCGGGCAA AGGACTTCCA CTTCGCCCTA TGGCAGGAAG AACGAGAAGG ACGGCTCGCC CATCCGGATG GCGGAACTGC TGGCTCAACT GGAGGGGGTA GCCTTTTCGG CCAGGGTCGC CGTGAACAAC CCCAAGAACC TCATGGACGC CAAGCGCCAG ATCAAGAAAG CCTTCCGTTA TCAGGCCGAG GGCAAGGGGT TTTCCTTCAT CGAGGCACTC TCCTCATGTC CCACCAACTG GGGCATGGAC GCCCTGGCTG CCAACGAACG GGTAGGGACC GAAATGTGTG CCTATTTCCC GCTCGGCGTC TTCAAAAACA CCGCTCAACT TTAA
|
Protein sequence | MQQVFKKPVS LKDVQTHFCP GCHHGTFHRL VAEAMDEFGV QKKTIGVASV GCSVFLYGYF DIDVVEAPHG RAPAVATGVK RARPDAFVFT YQGDGDLAAI GTSEIIHAAN RGEDITVIFV NNTTYGMTGG QMAPTTLVGQ RTSTSPYGRK NEKDGSPIRM AELLAQLEGV AFSARVAVNN PKNLMDAKRQ IKKAFRYQAE GKGFSFIEAL SSCPTNWGMD ALAANERVGT EMCAYFPLGV FKNTAQL
|
| |