Gene GSU1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1834 
Symbol 
ID2688661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand- 
Start bp1999994 
End bp2000674 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content59% 
IMG OID637126524 
ProductM50 family peptidase 
Protein accessionNP_952884 
Protein GI39996933 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.143147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACT TCTTTCTCAA GCTCTCCATC ATGCTCGTGC CGGCCCTTAT GGCAATCACC 
TGCCACGAAG TCTCCCACGG CTTCATTGCC GATCGCCTTG GCGACCGGAC GGCCCGCTTC 
ATGGGCCGGC TCACGCTGAA TCCTCTCAAG CATCTGGACC TCTTCGGTAC TCTCATGGTC 
TTCATTGTCG GCATCGGGTG GGCCAAGCCG GTTCCGGTCA ATTTCGGCAA CCTGCGTAAT 
CCGAAGCGGG ACATGGTCTG GGTTGCGGCC GCCGGGCCCA TTACCAACTT CACGCTGGCC 
TTTCTGTCTG CCATGGCCAT GCGCGGACTG GCCGCTGCAG GCAGCATGCT GCCGGATAGT 
TCGCCCCTTC AGATGGCCCT CGACCCGATC GTGCTGATGC TTGCCTTTTC GGTCTACATC 
AATCTGCTCC TGGGCATCTT CAATCTGATT CCGGTGCCTC CCCTGGACGG CGGCCGCGTG 
GCCGTGGGGC TTCTGCCCTA CCGGCAGGCC GAGGCCTTGG CGCGGTTTGA GCCCTACGGC 
ATGATCGTCA TCATCCTGCT GGTTTTTTTC ACCAATATAT TCGAGAAAGT CATCTCCCCG 
GTGGTGGATT TGGGCATCAG CATCCTCGCC GGGCCCCAAA GCGGACTGGT GTACAATGTC 
ACGCATTTTC TGATGAGATA A
 
Protein sequence
MENFFLKLSI MLVPALMAIT CHEVSHGFIA DRLGDRTARF MGRLTLNPLK HLDLFGTLMV 
FIVGIGWAKP VPVNFGNLRN PKRDMVWVAA AGPITNFTLA FLSAMAMRGL AAAGSMLPDS 
SPLQMALDPI VLMLAFSVYI NLLLGIFNLI PVPPLDGGRV AVGLLPYRQA EALARFEPYG 
MIVIILLVFF TNIFEKVISP VVDLGISILA GPQSGLVYNV THFLMR