| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1819 |
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| Symbol | xerD |
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| ID | 2686260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 1984912 |
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| End bp | 1985799 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637126508 |
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| Product | integrase/recombinase XerD |
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| Protein accession | NP_952869 |
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| Protein GI | 39996918 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.530175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC ATCTGGATCT TTTTCTCGGC TATCTGGTGG TCGAGAAGGG GCTTGCCCGC
AATTCGGTGG AGTCCTATGC CAGGGACCTG AGCCGTTATC TGGGGTATGT CGAGCAGCAC
GCGGGAGGTG ATCCTGCCGC AATCCGCCCC CTCCATGTTG CGGATTTCCT GGCGCACCTC
AAGGAGTCGG GACTCGGCGC CAGAAGCCGT GCCCGCGCCC TGTCCGCAGT ACGGATGTTT
CACCGTTTCC TGCTGGTGGA AGGGTATGCC GAAACCAATC CCACCAGCAT TATTGAAGCG
CCCCGCGTTC TCGCCAAGCT GCCCCAGGTC CTGACCGGCC GGGAGGTGGA GATGCTTCTG
GCCGCGCCGG CCGGTGATGC CCCCATCGAG GTGCGTGACC GGGCCATGCT GGAGCTTCTC
TATGCAACGG GTCTCCGGGT TTCCGAACTG GTGGGGCTGC GCACGAGGGA TGTGAATACC
TCAGCCGGTT ACCTAATGAC CGTGGGCAAG GGGGAAAAAG AGCGGCTGGT CCCCATGGGC
GAATCAGCCT GTGCAGCCGT AGTGCTCTAT CTTTCCTCGG CTAGGATTCA ACTGGGTCGG
GGCGGGGAGA GTCCCTTTCT TTTCCTGAGC AGGCTCGGTG AACGGATGAC TCGCCAGGCC
TTTTGGAATA TAATAAAAAA GCGCTCAAGG CAGGCCGGCA TTCTGAAGGG AATTTCGCCC
CACACGCTCA GGCATTCGTT CGCCACCCAT CTGCTCGAAA ACGGGGCGGA CCTACGGAGC
GTGCAGGCCA TGCTCGGCCA TGCGGATCTC TCAACAACCC AGATTTATAC GCATGTTACC
CGTGAACGGC TGAAGCGTCT GCACGAACAA TTCCACCCGC GCGGCTGA
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| Protein sequence | MNQHLDLFLG YLVVEKGLAR NSVESYARDL SRYLGYVEQH AGGDPAAIRP LHVADFLAHL
KESGLGARSR ARALSAVRMF HRFLLVEGYA ETNPTSIIEA PRVLAKLPQV LTGREVEMLL
AAPAGDAPIE VRDRAMLELL YATGLRVSEL VGLRTRDVNT SAGYLMTVGK GEKERLVPMG
ESACAAVVLY LSSARIQLGR GGESPFLFLS RLGERMTRQA FWNIIKKRSR QAGILKGISP
HTLRHSFATH LLENGADLRS VQAMLGHADL STTQIYTHVT RERLKRLHEQ FHPRG
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