Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1772 |
Symbol | ctpA-2 |
ID | 2686575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 1935660 |
End bp | 1936991 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637126452 |
Product | carboxy-terminal processing protease |
Protein accession | NP_952822 |
Protein GI | 39996871 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.011127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGA CCATCAAAGG TAAACGCGTC GCACTGTTGC TTGCCTCGCT TTGTGTTGTT GCCGTGCTCG GTGCCGGTGC CGTTCAGAAG CGGTGCGCAG CTGAGGGAGG GAACGATTAC GAGTCCATCG AGCTCTTCAC TGATGTGTTG GCGATCGTCA AGAAAAGCTA TGTTGAAGAG GTGGACACCA AGAAGCTCAT CTACGGAGCC ATCAACGGTA TGCTTGCTTC ACTTGATCCA CACAGCTCCT TCATGCCTCC CGACATGTAC AAGGAGATGA AGATCGATAC GAAGGGGTCT TTCGGCGGCC TGGGTATCGA GATTACGATC AAGGATGGAC TCCTCACGGT AATATCCCCC ATAGAGGACA CTCCTGCCTT CAAGGCCGGC ATCAAGGCGG GAGATCAAAT CTTGAAAATC GAAGACCGCT TTACCAAGGA CATGACCATC ATGGATGCGG TCAAGAGAAT GCGGGGCCCC AAGGGGACGA AAGTAACCCT TACCATTATG CGTGAAGGTT TCGACAAACC GAAGGAATTT ACGCTCGTTC GCGATACCAT TCAGGTCAAG AGCGTGCGGT TCAAATCGAT GGATCAGGGG TATGGTTACA TAAGAATCGC ACAGTTCCAG GAAAAGACGG ACGATGACCT GGTCAAGGCG CTCAAGGCAC TCAAGGAAGA GAATGGCGGA GATTTGAGGG GACTCGTCCT CGACCTCCGT AACGATCCGG GCGGACTTCT CGATCAGGCT GTCAAGGTTG CCGATCACTT TGTCGAAGAT GGACTCATTG TGTACACGGA GGGGCGTGAG AAGGAGTCGC GGATGCAGTT TACCGCCCGC AAGTCCGGCA CTGAACCCAA CTACCCGATG GTTGTGCTGA TCAACAGCGG AAGCGCCAGT GCTTCTGAAA TTGTCGCTGG TGCGCTGCAG GATCATAAGC GTGCCGTTGT CATGGGGACC CAGAGTTTCG GGAAAGGCTC GGTCCAGACA ATCATCCCCC TCTCCGATGA GTCTGGTCTC CGACTCACCA CGGCACGGTA TTTCACGCCG AGCGGTCGTT CCATCCAAGC CAAGGGCATA ACGCCGGACA TCGTTGTGGA GCGCGCGGAA ATCCAGTCTA CAGAGAAGAT GGAAGGCCAT ATCCGCGAGA AAGACCTTGA GAATCATTTC GATTCCGACT CGAAGGACGG ATCGGACAAC AAACAAAAAG GAACAGATAA AGGTGCTTCG GCAGCATCCA AGGTCGATGA GCAGTTGAAG AGCGATTATC AGGTGATGCG CGCGCTGGAT CTCCTGAAAG GGTGGGAAAT CCTGAAAACA ATAAGCAAAT GA
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Protein sequence | MFKTIKGKRV ALLLASLCVV AVLGAGAVQK RCAAEGGNDY ESIELFTDVL AIVKKSYVEE VDTKKLIYGA INGMLASLDP HSSFMPPDMY KEMKIDTKGS FGGLGIEITI KDGLLTVISP IEDTPAFKAG IKAGDQILKI EDRFTKDMTI MDAVKRMRGP KGTKVTLTIM REGFDKPKEF TLVRDTIQVK SVRFKSMDQG YGYIRIAQFQ EKTDDDLVKA LKALKEENGG DLRGLVLDLR NDPGGLLDQA VKVADHFVED GLIVYTEGRE KESRMQFTAR KSGTEPNYPM VVLINSGSAS ASEIVAGALQ DHKRAVVMGT QSFGKGSVQT IIPLSDESGL RLTTARYFTP SGRSIQAKGI TPDIVVERAE IQSTEKMEGH IREKDLENHF DSDSKDGSDN KQKGTDKGAS AASKVDEQLK SDYQVMRALD LLKGWEILKT ISK
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