| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1735 |
|---|
| Symbol | |
|---|
| ID | 2687241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 1900164 |
|---|
| End bp | 1901300 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637126415 |
|---|
| Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative |
|---|
| Protein accession | NP_952785 |
|---|
| Protein GI | 39996834 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.583415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA TCTTCGCTGT TATCGTCGGT ATCGTCGGTC TGTTGGTGGC CGGCATCGCC
TCGGCAGCAG AACCGTTCAG GATCGGAGCG CTTTTTTCCA TAACCGGTCC CGCGTCATTT
CTGGGAGAGC CCGAGAAGAA TACCCTGGAG ATGCTGGTGA AGGACGCCAA CGCCAGGGGT
GGGATTGGCG GCCGCAAACT TGAGCTGGTG GTCTACGACA CCCAGGGGGA CGTGACCAAG
GCGGTTCAAC TGGCCAACAA ACTGATCAAG AACGACAAAG TGAGTGTCAT CGTCGGACCG
AGTACCACCG GCGAAACCAT GGCGGTAATT CCCTTGGCGG AAAAGGAGAA AATCCCGCTC
ATTTCCTGCG CTGCGGGCAT CAAGATTACC GATCCGGTCA AAAAGTGGGT ATTCAAAACC
CCGGCCAATG ACCATGTGGC TGCCGAAAAG ATCCTGATCC AGGCGGCCAG GCTGAAGCAG
AAGTCTCTTG CCATTATCAC CGTTTCCGAC GGGTTCGGCT CCTCTGGGCG TGAACAGCTC
AAGGCCCTGG CCGGCCAGAA GGGCTTCAGA ATTGTGGCCG ATGAGGTGTA CGGTCCCAAG
GACACCGACA TGACCGCCCA ACTCACCAAG ATCAAGGCGG CCAAGCCCGA CGCGGTCATC
TGCTGGGGAA CAAATCCCGG TCCTGCACTC ATTGCCCGCA ACATGAAACA ACTCGGGATC
AAGGTCCCGC TCTACATGAG CCACGGTGTG GCGTCCAAAA AGTTCATCGA ACTGGCCGGG
GCCGATGCCG CCGAAGGGAT TATGTTGCCG GCGGGCAAGC TTGCCATTTT CGACAAGCTC
CCCAAGAACG ATCCCCAGTA CAAGTTGCTC AAATCGTATG ATGAATCCTA TCGCAAGGCA
TACGGCGTGG AGGCTTCGAC CTTCGGTGGT TACGCCTATG ATTCCTTCCT CCTGATTTCC
GGCGCCATGA AAAAGGGAAC CTCTCCCCAG CAGATCAGGG ACGGCCTTGA GCAGACCCGG
AAGCTCGTCA GCGTCTCGGG GATTTTCACC ATGTCCCCCT CGGATCATAA CGGTCTGGAT
CTTTCGGCAT TCGAGATGGT CCGCGTGACC AAAGGCGATT GGGAACTGAT CAAATAA
|
|---|
| Protein sequence | MNRIFAVIVG IVGLLVAGIA SAAEPFRIGA LFSITGPASF LGEPEKNTLE MLVKDANARG
GIGGRKLELV VYDTQGDVTK AVQLANKLIK NDKVSVIVGP STTGETMAVI PLAEKEKIPL
ISCAAGIKIT DPVKKWVFKT PANDHVAAEK ILIQAARLKQ KSLAIITVSD GFGSSGREQL
KALAGQKGFR IVADEVYGPK DTDMTAQLTK IKAAKPDAVI CWGTNPGPAL IARNMKQLGI
KVPLYMSHGV ASKKFIELAG ADAAEGIMLP AGKLAIFDKL PKNDPQYKLL KSYDESYRKA
YGVEASTFGG YAYDSFLLIS GAMKKGTSPQ QIRDGLEQTR KLVSVSGIFT MSPSDHNGLD
LSAFEMVRVT KGDWELIK
|
|---|
| |