Gene GSU1701 details

Gene Information

• Locus tag: GSU1701
• ID: 2687394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1863910
• End bp: 1864398
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637126382
• Product: HIT family protein
• Protein accession: NP_952752
• Protein GI: 39996801
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.652784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAACGTG TCTGGGCGCC TTGGCGCATG GAATACCTCG TGGATGAAAA ACCCGCCGGA 
TGCATCTTCT GTCCCGGTAA CGGACAGGCC AGCGACCGGG AGCGGCTCAT CCTCCACAGA 
ACACCGTTAT CTCTCGTGAT GCTGAATCGC TACCCCTATA CCAACGGTCA TCTAATGGTG 
GCTCCTCTGC GTCATACCGC CGACATGGAT TCCCTGTCCG ACGCGGAAAT GCTTGACCTG 
TTCCGCACGG TCCGGCTCTG CCGCTCCATC CTGCGGGATG CGGCCAGCCC CAATGGCTAC 
AATATCGGCA TCAACCTGGG AAAAGCGGCC GGTGCCGGTG TTGACGACCA TCTCCACATC 
CACGTGGTGC CCCGTTGGAA CGGTGACACG AATTTCATGG GGGTCGTGGC GGATCTACGG 
GTAGTGCCGG AAGGGCTTCA GGCTGCCTGG GACCGCCTGG CCCCGCTGTT CTCACGGGAG 
ACCCCATGA 

 

Protein sequence

MERVWAPWRM EYLVDEKPAG CIFCPGNGQA SDRERLILHR TPLSLVMLNR YPYTNGHLMV 
APLRHTADMD SLSDAEMLDL FRTVRLCRSI LRDAASPNGY NIGINLGKAA GAGVDDHLHI 
HVVPRWNGDT NFMGVVADLR VVPEGLQAAW DRLAPLFSRE TP