Gene GSU1690 details

Gene Information

• Locus tag: GSU1690
• Symbol: ribA
• ID: 2685374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1849051
• End bp: 1850253
• Gene Length: 1203 bp
• Protein Length: 400 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637126371
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II
• Protein accession: NP_952741
• Protein GI: 39996790
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase; [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II; [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.632341
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGTTG CACGTATTGA GGAAGCAATT GAAGATATCC GCCAAGGCAA GATGGTGATT 
CTGGTGGACG ATGAGGACCG TGAGAACGAA GGCGACCTGA CCATGGCCGC GGAAATGGTG 
ACCCCCGAGG CGATCAACTT CATGGCCCGG TTCGGGCGGG GGCTCATCTG TCTCACCATG 
ACGACCGAAC GGTGCGATCA TCTCCAACTG CCACTCATGG TTTCGGCAAA CACTTCCTCG 
TTCGGCACGG CCTTCACCGT ATCCATCGAG GCAAAACGGG GGGTGACAAC CGGCATCTCA 
GCGGCGGACC GGGCCCACAC CATTCTGACC GCTGTTGCCG ATGACGCAAA GGCAGATGAC 
CTCGCCCGTC CGGGCCATGT GTTCCCGCTG CGGGCCAAGC CGGGCGGAGT GCTCGTTCGT 
GCCGGCCAAA CCGAAGGCTC GGTCGATCTG GCTCGTCTTG CCGGACTCAA GCCCGCCGGC 
GTCATTTGTG AGATCATGAA CGATGACGGC ACCATGGCGC GAATGCCGCA ACTCAAGGTT 
TTCGCCAAGG AGCACGGAAT CAGGATCTGC ACCATCGCGG ATCTGGTGGC CTATCGGCTC 
AAGCACGAGT CCCTGGTGAG GCGTGCGGCA GACGTGCTTC TGCCCACGGA TTTCGGGGAA 
TTCAGGGCCA TTGCATTTGA GAACGACGTT GACCGACTGG AGCACTTGGC GCTGGTTAAG 
GGAGAGATCA GGGGGGATGA GCCGGTGCTC GTCCGGGTGC ATTCCGAGTG CATGACCGGC 
GACGTTTTCG GCAGCCTGCG CTGCGACTGC GGCAGCCAGC TCCATCGGGC TATGGAAATG 
ATCGAGGCCG AAGGGCGCGG GGTCATCCTC TACATGCGCC AGGAAGGGCG CGGTATCGGT 
CTGTTCAACA AGTTAAAAGC CTATGCCCTG CAGGACGAAG GGAAAGACAC GGTGGAGGCG 
AACCTGGCCC TGGGCTTCAA GCCGGACCTG CGTGATTATG GCATCGGCGC CCAGATTCTC 
GTGAACCTGG GGGTGCGGAA CATCAGGCTT CTGACCAACA ACCCCCGCAA ACTGATCGGC 
CTCCAGGGTT ACGGCATCAA TATCGTGGAG CGAGTTCCCA TCGAAATTCC GCCCACCACT 
ACGAATCTCG ACTATCTCAA GGCCAAGCGC GAAAAGCTCG GCCATTTGCT GGAAAATATC 
TGA 

 

Protein sequence

MPVARIEEAI EDIRQGKMVI LVDDEDRENE GDLTMAAEMV TPEAINFMAR FGRGLICLTM 
TTERCDHLQL PLMVSANTSS FGTAFTVSIE AKRGVTTGIS AADRAHTILT AVADDAKADD 
LARPGHVFPL RAKPGGVLVR AGQTEGSVDL ARLAGLKPAG VICEIMNDDG TMARMPQLKV 
FAKEHGIRIC TIADLVAYRL KHESLVRRAA DVLLPTDFGE FRAIAFENDV DRLEHLALVK 
GEIRGDEPVL VRVHSECMTG DVFGSLRCDC GSQLHRAMEM IEAEGRGVIL YMRQEGRGIG 
LFNKLKAYAL QDEGKDTVEA NLALGFKPDL RDYGIGAQIL VNLGVRNIRL LTNNPRKLIG 
LQGYGINIVE RVPIEIPPTT TNLDYLKAKR EKLGHLLENI