| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1656 |
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| Symbol | |
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| ID | 2687084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 1815737 |
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| End bp | 1816999 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637126337 |
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| Product | sensory box/response regulator |
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| Protein accession | NP_952707 |
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| Protein GI | 39996756 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2202] FOG: PAS/PAC domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCCCTC CGCTTCGTGT ACTCATACTT GAAGACTCGG AAGATGATTA CTTCCTCCTC
GTGAGAGCTC TCAAGCGCGA GTTCGATATC GTCCCCGAGC GGGTTGATTC GGAAGAGTCG
CTCCGCGCCA ATCTCTGCGA AAAGAGATGG GATATCGTAT TGTCGGATTA TTTCATGCCA
CAATTCGATG CCTTGGCTGC CTTAACCCTC ATCCAGAGCA TGAACCTGGA TATCCCCTTC
ATCATCGTTT CGGGCAAAAT CGGGGAATTT GAAGCGGTTA AAGCGATGAA AGCCGGCGCT
CATGACTATA TCATGAAGGG CGATTATACC CGCCTGATCC CCGCTATCCG CCGAGAACTC
CGCGAAGCCG TGATCCGGCA GGAACAACGT CGGACCGACC ACGAACTCCG CGAACAACTC
CACTTCCGAC AGGCGCTGAT TGACGCCATT CCCGCCCCTA TCTACTTCAT GGATACCACG
GGAATTTTCC TTGGCTGCAA CAAGGCGTTC GAGGCATTTT CGGGCCACAC TCAGGATGAA
ATCGTCGGGA AGACAATCTA TGACCTGATG CCCCCCTCGC TCGCAAAGCA CACTGACAGT
GCGGACAGGG AGCTGTTCGA GCACGGTGGC ATCCAGATCT ACGAGAGTGT CATATCCTTT
GCCGACGGTG CACTCCATGA CGTGATCTTT TATAAAGCCA CGTTCACCAC AACAGAAAAA
AACATCGGCG GCCTTGTAGG GACCATCCTC GACATTACCG AAAGGAAGCA GACTGAGGAA
AGACTTCGTT ACATGAGCAC CCACGACACA CTGACGGGAC TTTACAACCG AGCCTATTTT
CAGGAAGAAA TGGAGCGACT TGAGCAGGGA AGGCAATTCC CGGTCAGCGT AGTCGTATTT
GACGTGGACC GGCTGAAATA CGTCAATGAC AGCCAGGGAC ACGCTGCGGG GGACGAATTG
CTGATTCGAG CTGCCTTGGT GCTCAAAGGC GCCTTCCGTG CCGAAGACGT GGTGGCGAGA
ATAGGAGGAG ACGAATTCGC CGTTCTCCTT CCCTCAGCAG ACGCCGATGT AGTGCAGGAA
GCCCTGCGAA GAGTGATTGG CAAAATAGAG CAGAGCCAGA CGGAAGACCA TCCTGTTCCC
CTCAGTATCT CTTTCGGCGC TGCAACGGCC AGCAAGGGCG ACCGCCTCGA AGAGGTACTC
AAGCTTGCCG ACCGTAGAAT GTACGAGAAT AAGTTTAAAA AATGCTGCGT ATTACCTGCA
TAA
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| Protein sequence | MPPPLRVLIL EDSEDDYFLL VRALKREFDI VPERVDSEES LRANLCEKRW DIVLSDYFMP
QFDALAALTL IQSMNLDIPF IIVSGKIGEF EAVKAMKAGA HDYIMKGDYT RLIPAIRREL
REAVIRQEQR RTDHELREQL HFRQALIDAI PAPIYFMDTT GIFLGCNKAF EAFSGHTQDE
IVGKTIYDLM PPSLAKHTDS ADRELFEHGG IQIYESVISF ADGALHDVIF YKATFTTTEK
NIGGLVGTIL DITERKQTEE RLRYMSTHDT LTGLYNRAYF QEEMERLEQG RQFPVSVVVF
DVDRLKYVND SQGHAAGDEL LIRAALVLKG AFRAEDVVAR IGGDEFAVLL PSADADVVQE
ALRRVIGKIE QSQTEDHPVP LSISFGAATA SKGDRLEEVL KLADRRMYEN KFKKCCVLPA
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