Gene GSU1572 details

Gene Information

• Locus tag: GSU1572
• ID: 2687115
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1725013
• End bp: 1725540
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637126251
• Product: riboflavin biosynthesis protein RibD domain-containing protein
• Protein accession: NP_952623
• Protein GI: 39996672
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0262] Dihydrofolate reductase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.476036
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTCA TCTATTATGT CGCAGCAAGC CTGGACGGCT ACATTGCCAC GCCGGACGGG 
GGCGTTGCCT GGCTGGCACC GTTCGAAAAT GCCGGCGAGG ATTACGGTTA CGCTGAATTC 
TACGCGTCGG TCGATGCCCT GCTTATGGGG AGCGCCACTT ACGAGAAAAC GCTTTCGTTC 
GGCGCATGGC CCTACGAGGG AAAACCTTGC CGCGTCTTTT CAAGGCAAGA GCATGCGGTA 
CCGACTCATG ATGTCGTGAT TACCGATGCC ACACCGGACG ACGTGCTCCA TTCCCTGTTG 
CGCAACGGCT GCCGGCGCGC CTGGCTGGTC GGGGGCGGTG TGCTGGCGGC GTCATTTCTT 
CAACGGCGAT TGATCAGCGA GTACATCGTT TCCATCGTCC CGGTCATCTT GGGAGGGGGG 
ATTCCGATGA TTTCACCCAA CAGAATACGG GAGTCACTGA CGCTGCTGGA AACCAAAGTC 
TGCACCGGTG GTATCGTGCA GGTCCGATAC CGCTCGGAAG GGCACTGA 

 

Protein sequence

MDVIYYVAAS LDGYIATPDG GVAWLAPFEN AGEDYGYAEF YASVDALLMG SATYEKTLSF 
GAWPYEGKPC RVFSRQEHAV PTHDVVITDA TPDDVLHSLL RNGCRRAWLV GGGVLAASFL 
QRRLISEYIV SIVPVILGGG IPMISPNRIR ESLTLLETKV CTGGIVQVRY RSEGH