| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1567 |
|---|
| Symbol | |
|---|
| ID | 2687235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1721015 |
|---|
| End bp | 1721875 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637126246 |
|---|
| Product | M48 family peptidase |
|---|
| Protein accession | NP_952618 |
|---|
| Protein GI | 39996667 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.601696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGC TCAAGACAAC CCTTCTCCTC TCCCTGCTGA CCGTTCTCAT GGTCCTCATG
GGCAGTGCCC TGGGCGGCAA GTCCGGTATG ATCACGGCTT TTGTCATAGC CCTTGGCATG
AACTTCTTCT CCTACTGGTT TTCCGACAAG ATCGTCCTCA AGATGTACGG AGCCCGCGAG
GTCGACGAGC ACGACCATCC GCAGTTCTAC GGCATGGTTC GCCGCCTGGC CCTTCAGGCG
GGGCTCCCCA TGCCCAAGGT CTACATCATC CCGTCCGACA GCCCCAACGC CTTTGCCACG
GGAAGGAATC CGCAGCATGC CGCCGTAGCC GCGACAGAAG GCATCTTGCG GATTCTGTCG
CCGGATGAAC TCGAAGGGGT AATGGCCCAT GAACTTGCCC ACGTCCAGAA CCGGGACATC
CTGGTGGGAA CCATTGCCGC CACCTTCGCC GGTGCAATCT CCATGATCGG CAACATGCTC
CAGTGGGGCG CCATGCTCGG CGTCGGCAGA AACGACGACG AGGAGGGGGG CGCCGGCGGC
CTGATGGGTT CGCTGGTCAT GGCCATTGTC GCACCCATGG CGGCCATGCT GATCCAGATG
GCGGTCTCGC GCTCCCGGGA GTACCTGGCG GACGAAACCG GCGCAAGGAT CTGCGGCAGA
CCACTGGCAC TGGCCAATGC CCTGCGCAAA CTCCATGTCG CATCTCACAG CATACCCATG
CAGGAGGCCA GACCGGCCTC AGCACACATG TTCATCGTTA ATCCACTGAC CGGGGGCAGC
CTCCTCTCCC TCTTCTCGAC CCACCCGCCA ATGGAGGAGC GGATTGCCCG GCTTGAAGCG
ATGTCCAGAA CATCAAGGTA A
|
|---|
| Protein sequence | MNRLKTTLLL SLLTVLMVLM GSALGGKSGM ITAFVIALGM NFFSYWFSDK IVLKMYGARE
VDEHDHPQFY GMVRRLALQA GLPMPKVYII PSDSPNAFAT GRNPQHAAVA ATEGILRILS
PDELEGVMAH ELAHVQNRDI LVGTIAATFA GAISMIGNML QWGAMLGVGR NDDEEGGAGG
LMGSLVMAIV APMAAMLIQM AVSRSREYLA DETGARICGR PLALANALRK LHVASHSIPM
QEARPASAHM FIVNPLTGGS LLSLFSTHPP MEERIARLEA MSRTSR
|
|---|
| |