| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1561 |
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| Symbol | |
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| ID | 2685345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1714573 |
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| End bp | 1716561 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637126240 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | NP_952612 |
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| Protein GI | 39996661 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00865388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACC TGCTGTATGG CCTGACCCTG TTCATCGTCG TTGCCCTGAC CCTGGCATCC
CCGGCCGGGG CCCAGGATGC CATCGCCACT CATCCAATCC AGCCCGCCGG CTATTCTTCC
ATAAAGGTTT TCGACCGTAA CGGCCGGTTT GCGGGCCGGA TTCTTCCCGA AAAGCGCTAC
TGGGTTCCCA TCGACCGCAT CCCTGCCTTC CTGCAGAAGG CGGTTGTGGC GGTGGAGGAT
GCCCGCTTCT ACGAGCATAG CGGCATCGAT GTGCGGGGTA TCGCCCGTGC CCTGGTGAAG
GACGTGGTCA AGGGGCGGCT GGCCGAGGGT GGCTCGACCA TTACCCAGCA GCTGATCAAG
AACAAGTATC TCTCCGGCGA GAAGAGCATC GAGCGCAAAC TGGAAGAAGC CCGGCTGGCA
ATGGACTACG AGAAGAAATA CAGCAAGAAG CAGATCCTTG AGATGTATTT CAATGAAATT
TACTACGGCC GGGGAGCCTG GGGGATCGCC CAGGCGGCCC GCGTCTACTT CGACAAGAAC
CCTGAGGAAC TGACCGAGGC CGAATGCGCC CTGCTGGCGG GCGTGCCCAA AAATCCGGGC
CGCTACAATC CGTTGGGCAA GGCGGCTGAC GTGGGGCGGC GCAGGGACGT GGTCCTCAAG
CGGATGACGG ACCTCAATAT GATTTCCGCC CGGCAGAAGC AGAAGCTGCG CAGCCAGCGG
GTGGCCGTTA CCCCGCCGGA CCAGGCATCG TGGTATCTGG CCCATATCCG GAACCTGCTG
GTGGAGCGGT ACGGCCCCCA GGTCATCGAG GCGGGGGGAC TGGAAGTGAC AGCGGCCATG
GATCTGAACC TGCAGAAACT AGCCGAAAAG ACCCTGCGGG AAGGGGTGAA GCGGGTTTCG
CCCGACCTTC AGGGAGCGCT GATGTCCCTG GATCCCGCCA CTGGCGATGT ACTGGCGGCC
GTGGGGGGCG TGGACTTCGC CAAGAGCTCC TATGACCGGG CATTCCTGGC GCGGCGCCAG
CCCGGCTCGG CAATAAAGCC CCTGATCTAT GCGGCTGCCC TGGAAAAGGG GATCACTGCC
GCGAGCGTCT GGGATGATTC CCCGGTTGCC TACGTCCGCG GCGCCAACCA AACCTGGAAG
CCCAGGAACT ACGGCGGCGA GCAGTACGGG GAACTTTCCC TGAGGAAGGC CCTGGCCTAC
TCGAACAACG TCATCACAGT CAAGGTGCTG GAGACGATCG GCGTTCCCTA CTTCGTGGAG
ATTGCCAGGA ATCTGGGACT GTCGCTCCGA TCGCCCAACG ACCTCTCGCT GGCCCTGGGC
ACCGACGAGG TGACCCTGCG TGATCTCGTT TCGGCGTACA CCCCCCTGGC CAACGGAGGA
CTCCGGGCCG AAGCCAGGAC CGTGCTCCGG ATCTACGACA AGCGCCGTCG CGCCTGGACC
GACAATCCGC CGGCCGTCAC TCAGGCCATC TCGCCCGCCG CGGCCTATGT CACGACCCAG
ATGCTCAAGG ACGTGATGGT GTACGGCACG GCCAAGTCGC TCAGGAAGTT CAGCCAGGCC
CGGCCGGCCG CCGGCAAGAC CGGCACCACC GACGATTACC GGGACGCTTG GTTCATCGGC
TATACTCCGG GTGTCGTTAC CGGCATCTGG GTCGGCCACG ACAAGCCCAG GCCGGGAGGG
AAAGGGTTCA CGGGGGGTAC CGTGGCCGCG CCCATCTGGG AGCGGTTCAT GGGACCGGCC
CTGTCCGGTC GGCCGGCCGC CGACTTCGCC CGGCCGGAAA CGGTCGTTGC CGTGACCGTG
GACCCTGCCA CGGGATACCG GGCAGCGCCG GAGTGCCCGG AACAGCGGGA AGAATTATTT
ATTGCCGGCA CTGAGCCGGT CGCATACTGC CCTGCCCACG GCGGGGAGCT CCTGATGCCC
GAATCGCCCG ATCTGCCGGT GCCGGAAGGG GAAACCCGGG AGCCTGCGGC CACCGACAAT
CCGATGTGA
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| Protein sequence | MSNLLYGLTL FIVVALTLAS PAGAQDAIAT HPIQPAGYSS IKVFDRNGRF AGRILPEKRY
WVPIDRIPAF LQKAVVAVED ARFYEHSGID VRGIARALVK DVVKGRLAEG GSTITQQLIK
NKYLSGEKSI ERKLEEARLA MDYEKKYSKK QILEMYFNEI YYGRGAWGIA QAARVYFDKN
PEELTEAECA LLAGVPKNPG RYNPLGKAAD VGRRRDVVLK RMTDLNMISA RQKQKLRSQR
VAVTPPDQAS WYLAHIRNLL VERYGPQVIE AGGLEVTAAM DLNLQKLAEK TLREGVKRVS
PDLQGALMSL DPATGDVLAA VGGVDFAKSS YDRAFLARRQ PGSAIKPLIY AAALEKGITA
ASVWDDSPVA YVRGANQTWK PRNYGGEQYG ELSLRKALAY SNNVITVKVL ETIGVPYFVE
IARNLGLSLR SPNDLSLALG TDEVTLRDLV SAYTPLANGG LRAEARTVLR IYDKRRRAWT
DNPPAVTQAI SPAAAYVTTQ MLKDVMVYGT AKSLRKFSQA RPAAGKTGTT DDYRDAWFIG
YTPGVVTGIW VGHDKPRPGG KGFTGGTVAA PIWERFMGPA LSGRPAADFA RPETVVAVTV
DPATGYRAAP ECPEQREELF IAGTEPVAYC PAHGGELLMP ESPDLPVPEG ETREPAATDN
PM
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