Gene GSU1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1557 
Symbol 
ID2687143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1711580 
End bp1712404 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID637126236 
Productmechanosensitive ion channel family protein 
Protein accessionNP_952608 
Protein GI39996657 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.172425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCA TGGGACAGTA TCAGCAGCTG GTTGTCACGT ATGCAACGGT AATCGGGACA 
AAGATCATCG CCGCCATTTT GTTCTGGGTT GTCGGCCGCT GGCTGATCCA CCTGGTGCAG
CGGATGCTTC ATCAGGTTCT GGAGAAGCAG AAAGTCGATC CCAGTCTGAT GCGGTATCTG
GGCAACTTCC TCGGAGTGGC TCTGAACATC GTGCTGGTGG TGGCGATACT CGGCTACTTC
GGGGTGCAGA CCACCACCTT CGCCGCATTG GTGGCCGGCG TCGGCATTGC CATTGGCGCT
GCCTGGGGTG GGCTCCTTTC CAACCTGGCG GCCGGGGCGT TCCTTCTGGT GTTGCGCCCC
TTCAAGGTGG GGGATTTCGT CACCGCCGGA GGCATCACCG GCACCGTAAA CGAGATAGGC
CTCTTCGTGA CCGCCATCAA TACCCCTGAC AATGTCATGA CCATGGTGGG CAACGCCAAA
ATCTTCAACG ATACGATCCA GAACTTTACC ATCAATGACT ATCGCCGAGT GGAACTGAAG
TGCCAGCTGG CCGGAAGCGC CGATCACGTG GCAGCGATGG CGCTGCTGCG CGAGAAGCTC
GCGACGGTGC CGAATGTGCT GACAACGCCT GCGGTCGATG TGGAGATCCT CGACTTCACC
CTGGTGGGTC CGGTGCTCGC CGTGCGCCCT TACTGTCACA ACGACCATTA CTGGCAAGTC
TATTTCGACG GCAACCGGAC GATACGCGAA GCCCTCGCCG CGGCGGGATT CCCTGCTCCC
ATGCCGGCCC AGGTGGTGCT GGTCCAGAGT CCGCAGGGGG GATGA
 
Protein sequence
MDTMGQYQQL VVTYATVIGT KIIAAILFWV VGRWLIHLVQ RMLHQVLEKQ KVDPSLMRYL 
GNFLGVALNI VLVVAILGYF GVQTTTFAAL VAGVGIAIGA AWGGLLSNLA AGAFLLVLRP
FKVGDFVTAG GITGTVNEIG LFVTAINTPD NVMTMVGNAK IFNDTIQNFT INDYRRVELK
CQLAGSADHV AAMALLREKL ATVPNVLTTP AVDVEILDFT LVGPVLAVRP YCHNDHYWQV
YFDGNRTIRE ALAAAGFPAP MPAQVVLVQS PQGG