Gene GSU1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1555 
Symbol 
ID2685456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1706780 
End bp1710118 
Gene Length3339 bp 
Protein Length1112 aa 
Translation table11 
GC content60% 
IMG OID637126234 
Productsensory box histidine kinase/response regulator 
Protein accessionNP_952606 
Protein GI39996655 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAATG AACGCATCAT CCTGGGGCTT GTCAACAATG CCGCCTTATT GCTGTCGCTG 
GGTCTGATTT ACGACATCCT GTCCTACCGC CGGAACATTC AGACACCCCT GATGAACCGA
ATAGTTTCGG GAGTCACCAC CGGTGCCATT GCGGTGGCTC TCATGGCGAC ACCGGTCATA
TTCGGTCCCG GCATTATTTT CGACACCCGC ACCATCCTAC TGGGGCTTAC CGGCCTCTTC
TTCGGCACCA TTCCCACGGT AATCGCCATG GCCATCGCCG CTACCTACCG CCTTGCCCTC
GGCGGCGGGG GGACGGCAAT GGGAATTACC ACCATCGTCC TTTCCGGCGC ATGCGGCCTG
GCGTGGCGGC ACTACCGGCT GCGGCAGGCA AAGGCATTCT CATTCGGCGA GCTGTACCTG
TTCGGCGTGG TGGTCCACCT GGGGATGATC CTGTGTATGC TGCTCCTGCC CACGGAACTC
ATTGCCAGGA CCATGGCGTC TCTCGCCCTC CCCGTCATCC TGATCTACCC CCTGTGCACG
GCGCTGCTCG GCGGCCTGCT CTCCGCACGG CACAAGAAGT ATCAGCTGGA AAAGGAACTC
GAGGAAAGTG CAGCGCGCTA CAATCAGCTT GCCGCCCAGA GCCGCACCAT CACCTGGGAA
ATCGACGTGA CCGGCCTGTT CACCTATGTG AGCCCCGTGG TCGAGTCGGT GTTCGGGTAT
CTACCGAACG AACTGGTCGG TGCGATGCGT TTTTACGAAA TCCACCCCAC AGAGGGGCGC
GAGAGATTCA AGACATCGTT TTTGGAGATG TTCGCGAGCA AAACGATAGT GGAAGAGGTG
GTTCATCCCG TTGTGGCCGT GGACGGCAGG ACCATCTGGA TGAGCACCAA CGCCCTGCCG
ATACTGGATG AGCACGGAAC CCTGGTCGGC TACCGCGGAG CCTGCACGGA CATCAGCGAA
CGCAAGCAAC TGGAGGACCG GCTCAGGGAA AGCGAGCTTC TCCACCGCAC GCTTTTCGAG
CAGAACCCTT ATGGCGTCGT CATCATCGAC CCCGAAAACG CCACCCTCAT CGACTTCAAT
GACCAGGCTT GCCGTCAGCT CGGCTATACG CGGGAAGAGT TCAGCCGCCT GAAGATATCC
GACATCGACA TCGTCGAGTC GCCGGAGCAA ACCAGGAACC GCATTCAGAA AATTATGCGC
GACGGATACG ACGAGTTCGA AACCCTGCAG CGCACCAAGC AGGGCGAGCA GAGGTCCATC
CTGGTCAGGG CCCAGTATTC TCACATCAAG GGAAAGAACG TCTACCACTG CATCTGGCGG
GACATCACCG CGGAGAAAAA GGAGGCACAG CTCCTGCTGG CCAGGACGCA CCTCATCGAG
TACAGCGTTT CCCACTCGCT GGACGAACTG CTGACCGAGA CGCTCGACCG TCTCGAAGAG
CTTACCGGCA GCGAACTCGG TTTTTTCCAT CTGCTGCAGG AGGATCAGCG CACCATCACC
CTTCATGCCT GGTCTTCGCG CACGGCCGAA CTGTGTACGG CCGAGTGCAG CCACAGGCAT
TACGACATCA GCCGGGCCGG CGTCTGGACC GACTGTGCCT CTCTGCGCCA GCCGGTCATC
CATAATGACT ATGCGTCGCT GCCCCACCGC AAGGGTCTCC CCCTCGGGCA CGCCCCGGTG
AACCGGCAGC TGACCATGCC GATCATGCGC CATGACAAGA TTGCCGGAAT CCTCGGCATC
GGTAACAAGA AGACCGACTA CACCCGGGAA GACATCGCCG TTGTTTCCCG TTTTGCGGAC
CTCGTCTGGG ATATTGCCGA GCGCAAGCAA GTCCACGACT CGCTCCGCGA GAGCGACGAG
AAATTCTCGT CGGCCTTCAA CAACGCCCCG CTCATGATCA CCATCAGCAC CATCGAGGAT
GGCCGGTACC TGGATGTGAA CCAGCGGTTC CTCGACATCT CCGGCTTCAG CAGGGAAGAG
GTCTTGGCCA ACACCGCCGT GTCCCTCGGG TGGCTCGGTG CATCCGACCG GACACGGTTG
AAGGAAATGA TGCTGAAGAA CGGCTCGATC CAGGATCTGG AACTGGAGAC GCGATCCAAA
TCGGGCGCAA AGGTGCTCTG CAAGTACTGG GGAACGATCA TCCCCGTTGC GGGCCGAAAA
CGGCTCCTCT CCATCGCCCT GGATATCACG GAACACCGCA GAATGGAGCA ACAGCTCTTC
CAGGCGCAGA AAATGGATTC CATCGGCCGT TTGGCCGGCG GCGTGGCCCA CGATTTCAAC
AACATGCTGA GCATCATCAT CGGCCGGACC GAGCTCGCGC TGATGCAGAC GGACCGGGAC
AATCCCCTGT ATCACAACCT GGAAGAGATT CAGGGCGCCG CCAAGCGGTC CGCCGAAATC
ACCAAGCAGT TGCTCACGTT CTCGCGCAAG CAGACCATCG TGCCCAAGGT GCTGGACCTG
AACGACACCA TTACCAGCAT GCTCAAGATG CTGCGCAGGC TGCTGGGCGA AAATATCAAG
CTGGGCTGGA ATCCGGGCTA TAACCTCAGG CGGGTTAAGA TCGACCCCTC CCAGTTGGAC
CAGATCCTGG TCAACCTGTG CGTGAACGCC CGGGACGCGA TTGCCGGCAC GGGGGAGATC
AACATCCAGA CCTCGAATGG AACCTTCGGG GAGGCCAGCG GCACGGACGA CATCCCCCCC
GGCGACTACG TGCTGCTGGA GGTGAGCGAC ACGGGCTGCG GCATCGGGCC GGAACTGCTT
GAACACATCT TCGAGCCGTT CTTCACCACC AAGGAACTGG GCCACGGCAC CGGCCTGGGA
CTGGCAACGG TCTACGGCAT AGTCCAGCAA TGCGGCGGCC AGATCAGGGT CAGCAGCTTA
CCGGGTAACG GATCCACGTT CCGTATCTAT TTCCCCGCCG CAAGCGCCCC GACCGATGCC
CCGATCCCGG CAGCGCCCGA GATTATCGGC GGGACGGAAA CCATCCTGTT CGTAGAAGAC
GAAGCAGCCA TCATGCACAT GGGCGCAGCA ATGCTCGAAA AGCTGGGGTA CAAGGTTCTG
CCGGTGAACT CGCCGGAGGA GGCCCTGCAG AGTGCCGTGA CACATGCGGG GTCCATCAAC
CTGCTGATTA CCGACGTCAT CATGCCCGGT ATGAACGGCC ACGACCTGGC AGTCCAGCTG
CGCGCGGCCA ATCCGGACAT AAAAATCCTC TTCATGTCGG GCTACACTTC GGACATCCTG
TCCAATCGGA GTGAGCTGGG ACAGGACCTG CACTTTCTGC AGAAGCCATT CACCATTACA
ACACTGGATG GAAAAATCAG GGAGGCGCTG CAGGGGTGA
 
Protein sequence
MVNERIILGL VNNAALLLSL GLIYDILSYR RNIQTPLMNR IVSGVTTGAI AVALMATPVI 
FGPGIIFDTR TILLGLTGLF FGTIPTVIAM AIAATYRLAL GGGGTAMGIT TIVLSGACGL
AWRHYRLRQA KAFSFGELYL FGVVVHLGMI LCMLLLPTEL IARTMASLAL PVILIYPLCT
ALLGGLLSAR HKKYQLEKEL EESAARYNQL AAQSRTITWE IDVTGLFTYV SPVVESVFGY
LPNELVGAMR FYEIHPTEGR ERFKTSFLEM FASKTIVEEV VHPVVAVDGR TIWMSTNALP
ILDEHGTLVG YRGACTDISE RKQLEDRLRE SELLHRTLFE QNPYGVVIID PENATLIDFN
DQACRQLGYT REEFSRLKIS DIDIVESPEQ TRNRIQKIMR DGYDEFETLQ RTKQGEQRSI
LVRAQYSHIK GKNVYHCIWR DITAEKKEAQ LLLARTHLIE YSVSHSLDEL LTETLDRLEE
LTGSELGFFH LLQEDQRTIT LHAWSSRTAE LCTAECSHRH YDISRAGVWT DCASLRQPVI
HNDYASLPHR KGLPLGHAPV NRQLTMPIMR HDKIAGILGI GNKKTDYTRE DIAVVSRFAD
LVWDIAERKQ VHDSLRESDE KFSSAFNNAP LMITISTIED GRYLDVNQRF LDISGFSREE
VLANTAVSLG WLGASDRTRL KEMMLKNGSI QDLELETRSK SGAKVLCKYW GTIIPVAGRK
RLLSIALDIT EHRRMEQQLF QAQKMDSIGR LAGGVAHDFN NMLSIIIGRT ELALMQTDRD
NPLYHNLEEI QGAAKRSAEI TKQLLTFSRK QTIVPKVLDL NDTITSMLKM LRRLLGENIK
LGWNPGYNLR RVKIDPSQLD QILVNLCVNA RDAIAGTGEI NIQTSNGTFG EASGTDDIPP
GDYVLLEVSD TGCGIGPELL EHIFEPFFTT KELGHGTGLG LATVYGIVQQ CGGQIRVSSL
PGNGSTFRIY FPAASAPTDA PIPAAPEIIG GTETILFVED EAAIMHMGAA MLEKLGYKVL
PVNSPEEALQ SAVTHAGSIN LLITDVIMPG MNGHDLAVQL RAANPDIKIL FMSGYTSDIL
SNRSELGQDL HFLQKPFTIT TLDGKIREAL QG