Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1555 |
Symbol | |
ID | 2685456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 1706780 |
End bp | 1710118 |
Gene Length | 3339 bp |
Protein Length | 1112 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126234 |
Product | sensory box histidine kinase/response regulator |
Protein accession | NP_952606 |
Protein GI | 39996655 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAATG AACGCATCAT CCTGGGGCTT GTCAACAATG CCGCCTTATT GCTGTCGCTG GGTCTGATTT ACGACATCCT GTCCTACCGC CGGAACATTC AGACACCCCT GATGAACCGA ATAGTTTCGG GAGTCACCAC CGGTGCCATT GCGGTGGCTC TCATGGCGAC ACCGGTCATA TTCGGTCCCG GCATTATTTT CGACACCCGC ACCATCCTAC TGGGGCTTAC CGGCCTCTTC TTCGGCACCA TTCCCACGGT AATCGCCATG GCCATCGCCG CTACCTACCG CCTTGCCCTC GGCGGCGGGG GGACGGCAAT GGGAATTACC ACCATCGTCC TTTCCGGCGC ATGCGGCCTG GCGTGGCGGC ACTACCGGCT GCGGCAGGCA AAGGCATTCT CATTCGGCGA GCTGTACCTG TTCGGCGTGG TGGTCCACCT GGGGATGATC CTGTGTATGC TGCTCCTGCC CACGGAACTC ATTGCCAGGA CCATGGCGTC TCTCGCCCTC CCCGTCATCC TGATCTACCC CCTGTGCACG GCGCTGCTCG GCGGCCTGCT CTCCGCACGG CACAAGAAGT ATCAGCTGGA AAAGGAACTC GAGGAAAGTG CAGCGCGCTA CAATCAGCTT GCCGCCCAGA GCCGCACCAT CACCTGGGAA ATCGACGTGA CCGGCCTGTT CACCTATGTG AGCCCCGTGG TCGAGTCGGT GTTCGGGTAT CTACCGAACG AACTGGTCGG TGCGATGCGT TTTTACGAAA TCCACCCCAC AGAGGGGCGC GAGAGATTCA AGACATCGTT TTTGGAGATG TTCGCGAGCA AAACGATAGT GGAAGAGGTG GTTCATCCCG TTGTGGCCGT GGACGGCAGG ACCATCTGGA TGAGCACCAA CGCCCTGCCG ATACTGGATG AGCACGGAAC CCTGGTCGGC TACCGCGGAG CCTGCACGGA CATCAGCGAA CGCAAGCAAC TGGAGGACCG GCTCAGGGAA AGCGAGCTTC TCCACCGCAC GCTTTTCGAG CAGAACCCTT ATGGCGTCGT CATCATCGAC CCCGAAAACG CCACCCTCAT CGACTTCAAT GACCAGGCTT GCCGTCAGCT CGGCTATACG CGGGAAGAGT TCAGCCGCCT GAAGATATCC GACATCGACA TCGTCGAGTC GCCGGAGCAA ACCAGGAACC GCATTCAGAA AATTATGCGC GACGGATACG ACGAGTTCGA AACCCTGCAG CGCACCAAGC AGGGCGAGCA GAGGTCCATC CTGGTCAGGG CCCAGTATTC TCACATCAAG GGAAAGAACG TCTACCACTG CATCTGGCGG GACATCACCG CGGAGAAAAA GGAGGCACAG CTCCTGCTGG CCAGGACGCA CCTCATCGAG TACAGCGTTT CCCACTCGCT GGACGAACTG CTGACCGAGA CGCTCGACCG TCTCGAAGAG CTTACCGGCA GCGAACTCGG TTTTTTCCAT CTGCTGCAGG AGGATCAGCG CACCATCACC CTTCATGCCT GGTCTTCGCG CACGGCCGAA CTGTGTACGG CCGAGTGCAG CCACAGGCAT TACGACATCA GCCGGGCCGG CGTCTGGACC GACTGTGCCT CTCTGCGCCA GCCGGTCATC CATAATGACT ATGCGTCGCT GCCCCACCGC AAGGGTCTCC CCCTCGGGCA CGCCCCGGTG AACCGGCAGC TGACCATGCC GATCATGCGC CATGACAAGA TTGCCGGAAT CCTCGGCATC GGTAACAAGA AGACCGACTA CACCCGGGAA GACATCGCCG TTGTTTCCCG TTTTGCGGAC CTCGTCTGGG ATATTGCCGA GCGCAAGCAA GTCCACGACT CGCTCCGCGA GAGCGACGAG AAATTCTCGT CGGCCTTCAA CAACGCCCCG CTCATGATCA CCATCAGCAC CATCGAGGAT GGCCGGTACC TGGATGTGAA CCAGCGGTTC CTCGACATCT CCGGCTTCAG CAGGGAAGAG GTCTTGGCCA ACACCGCCGT GTCCCTCGGG TGGCTCGGTG CATCCGACCG GACACGGTTG AAGGAAATGA TGCTGAAGAA CGGCTCGATC CAGGATCTGG AACTGGAGAC GCGATCCAAA TCGGGCGCAA AGGTGCTCTG CAAGTACTGG GGAACGATCA TCCCCGTTGC GGGCCGAAAA CGGCTCCTCT CCATCGCCCT GGATATCACG GAACACCGCA GAATGGAGCA ACAGCTCTTC CAGGCGCAGA AAATGGATTC CATCGGCCGT TTGGCCGGCG GCGTGGCCCA CGATTTCAAC AACATGCTGA GCATCATCAT CGGCCGGACC GAGCTCGCGC TGATGCAGAC GGACCGGGAC AATCCCCTGT ATCACAACCT GGAAGAGATT CAGGGCGCCG CCAAGCGGTC CGCCGAAATC ACCAAGCAGT TGCTCACGTT CTCGCGCAAG CAGACCATCG TGCCCAAGGT GCTGGACCTG AACGACACCA TTACCAGCAT GCTCAAGATG CTGCGCAGGC TGCTGGGCGA AAATATCAAG CTGGGCTGGA ATCCGGGCTA TAACCTCAGG CGGGTTAAGA TCGACCCCTC CCAGTTGGAC CAGATCCTGG TCAACCTGTG CGTGAACGCC CGGGACGCGA TTGCCGGCAC GGGGGAGATC AACATCCAGA CCTCGAATGG AACCTTCGGG GAGGCCAGCG GCACGGACGA CATCCCCCCC GGCGACTACG TGCTGCTGGA GGTGAGCGAC ACGGGCTGCG GCATCGGGCC GGAACTGCTT GAACACATCT TCGAGCCGTT CTTCACCACC AAGGAACTGG GCCACGGCAC CGGCCTGGGA CTGGCAACGG TCTACGGCAT AGTCCAGCAA TGCGGCGGCC AGATCAGGGT CAGCAGCTTA CCGGGTAACG GATCCACGTT CCGTATCTAT TTCCCCGCCG CAAGCGCCCC GACCGATGCC CCGATCCCGG CAGCGCCCGA GATTATCGGC GGGACGGAAA CCATCCTGTT CGTAGAAGAC GAAGCAGCCA TCATGCACAT GGGCGCAGCA ATGCTCGAAA AGCTGGGGTA CAAGGTTCTG CCGGTGAACT CGCCGGAGGA GGCCCTGCAG AGTGCCGTGA CACATGCGGG GTCCATCAAC CTGCTGATTA CCGACGTCAT CATGCCCGGT ATGAACGGCC ACGACCTGGC AGTCCAGCTG CGCGCGGCCA ATCCGGACAT AAAAATCCTC TTCATGTCGG GCTACACTTC GGACATCCTG TCCAATCGGA GTGAGCTGGG ACAGGACCTG CACTTTCTGC AGAAGCCATT CACCATTACA ACACTGGATG GAAAAATCAG GGAGGCGCTG CAGGGGTGA
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Protein sequence | MVNERIILGL VNNAALLLSL GLIYDILSYR RNIQTPLMNR IVSGVTTGAI AVALMATPVI FGPGIIFDTR TILLGLTGLF FGTIPTVIAM AIAATYRLAL GGGGTAMGIT TIVLSGACGL AWRHYRLRQA KAFSFGELYL FGVVVHLGMI LCMLLLPTEL IARTMASLAL PVILIYPLCT ALLGGLLSAR HKKYQLEKEL EESAARYNQL AAQSRTITWE IDVTGLFTYV SPVVESVFGY LPNELVGAMR FYEIHPTEGR ERFKTSFLEM FASKTIVEEV VHPVVAVDGR TIWMSTNALP ILDEHGTLVG YRGACTDISE RKQLEDRLRE SELLHRTLFE QNPYGVVIID PENATLIDFN DQACRQLGYT REEFSRLKIS DIDIVESPEQ TRNRIQKIMR DGYDEFETLQ RTKQGEQRSI LVRAQYSHIK GKNVYHCIWR DITAEKKEAQ LLLARTHLIE YSVSHSLDEL LTETLDRLEE LTGSELGFFH LLQEDQRTIT LHAWSSRTAE LCTAECSHRH YDISRAGVWT DCASLRQPVI HNDYASLPHR KGLPLGHAPV NRQLTMPIMR HDKIAGILGI GNKKTDYTRE DIAVVSRFAD LVWDIAERKQ VHDSLRESDE KFSSAFNNAP LMITISTIED GRYLDVNQRF LDISGFSREE VLANTAVSLG WLGASDRTRL KEMMLKNGSI QDLELETRSK SGAKVLCKYW GTIIPVAGRK RLLSIALDIT EHRRMEQQLF QAQKMDSIGR LAGGVAHDFN NMLSIIIGRT ELALMQTDRD NPLYHNLEEI QGAAKRSAEI TKQLLTFSRK QTIVPKVLDL NDTITSMLKM LRRLLGENIK LGWNPGYNLR RVKIDPSQLD QILVNLCVNA RDAIAGTGEI NIQTSNGTFG EASGTDDIPP GDYVLLEVSD TGCGIGPELL EHIFEPFFTT KELGHGTGLG LATVYGIVQQ CGGQIRVSSL PGNGSTFRIY FPAASAPTDA PIPAAPEIIG GTETILFVED EAAIMHMGAA MLEKLGYKVL PVNSPEEALQ SAVTHAGSIN LLITDVIMPG MNGHDLAVQL RAANPDIKIL FMSGYTSDIL SNRSELGQDL HFLQKPFTIT TLDGKIREAL QG
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