Gene GSU1551 details

Gene Information

• Locus tag: GSU1551
• ID: 2687056
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1702598
• End bp: 1704583
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637126230
• Product: signal domain-containing protein
• Protein accession: NP_952602
• Protein GI: 39996651
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2208] Serine phosphatase RsbU, regulator of sigma subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.673251
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCATGC AGGTCACGAG CCTCAAAGCA AAATTCATTT CCGTCATCGT CCTCATCAGT 
TTAGCGGTGG GGGGGCTGAC CCTCTTCGCC TTTGACACCA GCACGTCCGG CATCATTGAC 
GATCTGGCTC TCCGGTTCGC TACCAAGGAG GCGCTGCTGG AGAAAAACAA GGTCATCTCC 
GTCATCGAGC GGGAGGTGGC ACTGGCCCGG ATGATGGCCC GGGACGTCAC CCTCAGGCAC 
TGGGCATCGG ACGAGGGGAA CCGCGAACTG CAGCGCGCGG CCTTTGCGGA GCTGGAAAAC 
TACCGCACCC TCTACCGGGA CAAAAGTTTC TTCATTGCCC TGGCGGCGTC GAACCATTAT 
TACGTCTATG ACAAGCGAAA CGGACACGGC CGTGTCGAAA TGGTGACACT TGACGGGTCC 
AAGCCCCACG ATCGCTGGTT CTTCGAGGGG CTTCGCTCAA TCGACGACTA CGCCCTGAAC 
CTGGATTACA ACGCCACCCT GCAGGAGATC AAGGTCTGGT TCAACGCGGC CATGACCGAC 
GGCAGCGGCC GAAAGATCGG CATCTGCGGC GGCGGCATCA CCATTTCCGA CTTCCTCAAT 
CAGGTGGTGC ACACCCGTCA GAAGGGGCTT TCAACCATAC TGATGGACCG CGCCGGGGTG 
GTGCAGGCCC ACGAGGACCG GAAAGTGGTG GAGCATAACG CCAACACCCG CGACGTGGAC 
CGAAAGATCA CGATCTTCAC CCTCATGGGC GATCCGGCGC GGGAAGCGCA GGTGCGGGGG 
GCCATCGAGT CCCTGGCGGC CGGGCGGAGC GAGGTGGAGG CGTTCCCGGT GCGGTTCGGC 
GGCAAGAGCT ATCTCATGGC GATTTCGTTC CTGGAGGGGA TGGGCTGGTT CAACGTAGTT 
CTGGTCGACG TATCCCGCGT CATCAGCATG AAGCAGTTCC TCCCCATCAT CGCGGTCATG 
TCCCTGTCGC TGCTGTTGGG CATCCTGGCC ATCGGCTTCC TGATAAACCG GATGGTGCTG 
ACGCCCCTGG GGAGACTGTC CGCCGCGTCC CGGGAGATTG CCGCCGGGCG GTACGATATT 
TCGCTGCCCG TGACCGGCCG GGACGAACTG GGGGAGCTGA CCGGCTCGTT CAATGCCATG 
AGTGCCATGG TCCTGGACCA CACCACCAAT CTCGAAGCCA GGGTCAGGGA ACGCACCGAC 
GAACTTTCCG CGGCCAACCG ACTGCTGGAG GATTCCCAGC GCAGGATCAT GGAGAGCATC 
ACCTATGCCC GCATGATCCA GACCTCGATC CTGCCCGACC GGGAGTCGCT GGAGCGCTGC 
CTGGGCGACC ATTTCATCCT CTACCGGCCC AAGGAGCCGG TTGGGGGGGA TTTCTACTAC 
CTGCGCGAGT TCCCGGACCA CTTCCTGCTG GCGGTGATCG ACTGCACGGG CCACGGCATT 
CCGGGCGCGT TCATGACCAT GACCGTTAAC GCGGTGCTGA ACCACGTGGT GGATGTCTGC 
TGCAACGACG ATCCGTCCCG CATCCTGGCG GAGCTCAATC GCGTGCTGCG GAACACCCTG 
CACCTGCGGG ACGTGGATGC CGGACTCGAC ATCGCTCTCT GCATGGTGGA GCGGCGAGCG 
GGCCGGTTGA CCTTCGCCGG GGCGGGGCTT CCGCTGGTGC TGGTTTCCGG CGGAGAGGTG 
CGGGAGGTGC GCGGTGACCA CCAGCGCGTG GGCTACAAGG GCTCCCGGAT CGACTACCGG 
TACACCAACC ATGTGCTGAC CCCGGCAGCC GGAGACAGCT GCTACCTGAC GACCGACGGC 
CTGCTGGACG AGCCGGGCGG AGTCAAGGGA TACGGTTTCG GCTCGGAGCG GCTCAGGATG 
ATCCTGGCCG ATCATGCGCA CCTCGCCATG CCGGCCCAGG CCGAGGCTGT CGAGGCGGCC 
CTGGACGCCT ATCGGGGCGA CCATCGCCAG CGCGACGACA TTACCTTGGC GGGATTCCGT 
TTCTGA 

 

Protein sequence

MSMQVTSLKA KFISVIVLIS LAVGGLTLFA FDTSTSGIID DLALRFATKE ALLEKNKVIS 
VIEREVALAR MMARDVTLRH WASDEGNREL QRAAFAELEN YRTLYRDKSF FIALAASNHY 
YVYDKRNGHG RVEMVTLDGS KPHDRWFFEG LRSIDDYALN LDYNATLQEI KVWFNAAMTD 
GSGRKIGICG GGITISDFLN QVVHTRQKGL STILMDRAGV VQAHEDRKVV EHNANTRDVD 
RKITIFTLMG DPAREAQVRG AIESLAAGRS EVEAFPVRFG GKSYLMAISF LEGMGWFNVV 
LVDVSRVISM KQFLPIIAVM SLSLLLGILA IGFLINRMVL TPLGRLSAAS REIAAGRYDI 
SLPVTGRDEL GELTGSFNAM SAMVLDHTTN LEARVRERTD ELSAANRLLE DSQRRIMESI 
TYARMIQTSI LPDRESLERC LGDHFILYRP KEPVGGDFYY LREFPDHFLL AVIDCTGHGI 
PGAFMTMTVN AVLNHVVDVC CNDDPSRILA ELNRVLRNTL HLRDVDAGLD IALCMVERRA 
GRLTFAGAGL PLVLVSGGEV REVRGDHQRV GYKGSRIDYR YTNHVLTPAA GDSCYLTTDG 
LLDEPGGVKG YGFGSERLRM ILADHAHLAM PAQAEAVEAA LDAYRGDHRQ RDDITLAGFR 
F